Simple sequence repeat (SSR)
>UN72668 CTAAAAGTTGCTTTTGAACAAGGAAACACAATGTTGATACAGACCAAAAAAGACCAACAATCCCGGAACTATTGAACTACAATAACTGCATAAT CTACTATCTAGTAACTATATTAAGATCCTTATTCTCAACAAGTTTTTAGCTTTTTTGTCTTTATTTCCGACCAAAAATACATTGCACACATCTT TAACAAGAATGATAAGTTGACTTTTAACTTTTGACCTTTTTCTATAAATATCAATTTGTTTCTTTAATCTTGTTATCAGGCATTGAGGGGTTCA GCCTCCACTTCTCTCACCTTTTCTAGCGGCCCTGATCTTTCTGCAGCCCCCAAAAGACGCCTTTGCAACATGGATGCAACGAAGAGGAAAAATG CGCACATTCCAAACATAAAGGAGATCGGGAATGCATCAACGTTGTAAAGCACAATGCATACAAAAATATTGAGCGGAATGCGGAAAAAGTTCAT GATTGTGCTACGGGCCTCCTCTGGAATATACTGGGACCTCATTTTCATGATAGAAGGCCAAAACAAGCCGACGCACGCTTCAAAAACACAGAAT CCAAGCAGTTGGATACAACCCGAAAATGAAATGCTTCCACCCTTTACAGTCGAAGGAGCCACCAGAAAGCTTGTTACGACAGGAAGAAATAGAG CGGCAGAAGAGACGAGAAAAACAATCTGCATGTAACTCTCGACTCTGACTGATGCACGCGCCATCAACCTTGAAGCAAATGAGCTTCCCAACAT GGAAGATAACATGAAAATGGAGAAAATGAAACCGTGTGGAATGTCTTCACCATTTGGGCTCAAAGCAGGAGTCCACAAGAACACAAAAGTGTAC ATGGAACCTTCAAATAGGGACTGAATTGCACCCAATAATGCTATCTTTTCATCAGATGCAATTGCAACAGCAGCTCCCTTGAATTGAGTCAACA AGTCCTTGCTTTCTGTTGGGTCACCATAGTTTTCAGTCCAAGATGATATAATGATGGCCATCCCGATGGCGAGAAAACATGAGGCTGCATCAAA AGGAGCAACGGGTCCCAATGCTAATGTGCCGACTAGTAGATTCCCAAGTAAACCAGCCAAAATGGCAACAAGCCCATTTCCAAGAAATACTGCC TTTGAGAATGTCAATGATAGCCATTGTTGCTCAAAACCCCTCTTGTTGTGTTCAGCAACCAGCCACGACTCGAATGATGAAAAGAGGAGAGAAG TGGCAATCCCTCCCAAAATACGTCCAATCATTAGAATTCTGTACTCAGGTGAATGCTTGGTGATGCAGCTCAAAATGTAAGTAACACAGTACGT TATTGAAGCCCTTTTCCGACCATGTTTATCAGCTAATGACCCAACAATAGTTCCAAAAAGCATGGAAGATCCAAAACCAGCAATAAAGAGCTGT CCAATATCTCCTTTACCGAACCCATATGTAGTATAAAGATAGTAGACATATGGCCCCTGCAACCAGTCACCAGCCATCATGAGTGAATAAACAA GAAGGTAATTGTTCTTGAATGAATTGAAAGCAGAGGAAGTGTTGATTCGATCTTTGTTGTTTTTACTAAGTTCTAATGTTGCTACAATTACACC AAGAGCTCCAAATACTAGCAAGTAAAAAAGCTCCATGGTTTTTGGTTCTTGGTTTCAGTGTGTGTGTGTGTGAAAGAATGTGGAAAGCAGAGAG TAAAGAGATTTGGGAGTGGT |
Primers for UN72668 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | AACCAGTCACCAGCCATCAT | 60.395 | 20 | TCCCAAATCTCTTTACTCTCTGC | 59.036 | 23 | 237 | 1471 | 1707 |
2 | AACCAGTCACCAGCCATCAT | 60.395 | 20 | TCCCAAATCTCTTTACTCTCTGCT | 59.921 | 24 | 237 | 1471 | 1707 |
3 | AACCAGTCACCAGCCATCAT | 60.395 | 20 | CTCCCAAATCTCTTTACTCTCTGC | 59.921 | 24 | 238 | 1471 | 1708 |