Simple sequence repeat (SSR)
| >UN71565 ACTGAACTTCTTCTCGAGCTCCCTAACAAGCTTGGTATGGATCTTGCGGAACGGTTTCCTCAATCTGTATGGAACATGGACCACAACCGCCTTT TTGTTTCCAGAGATATCAATTTGATTTGCAGAGTTGATGTACAAGTCCTTCAAGTCACTCTTGAGCTCTTGGTGTGTGTTCTCCAAGTCAAACA ATGCCTGAGCAACGCTCTGCTCAAACTCAGTGGGCTCGACATCCTTGTCCTTTTGGATCTTCTTCATTGAGGTATACATCTTGAAGATGAATTC CTAAAGAGCTTGGAGTTCAGTTCGGGACGATGAGAAGGCTGCTGCTGCTGCTGCTGCTGTTGTTGTTGCTGAGGTGGTACGTTTAGAGGTTGAG AGTTGTAGTGCGTAAAAGGCTGAGAGTATAGTGGATTCATCACACCCTGTGTATGAAGGGAGGTGGCGGTGGCACCACTGAAGTGGCTCTGGGA AGATTCGTCTTGTGATGGATCCTTAAATCCGACCTGTGTAAACAAGCCTTGTGAACCATGACCCATGTAGTCCTGAGACATAAAATCGTTTCCA GCACCAAAACGTGAAAATCCAGCTTGGGAATTATGATTCAAAAAGCTACCTGGATACCCAGCTTGGGTCGCAGGAGTAGCATAGTCAACAGCAT ATCCACCTTGGGAAGCCTGTGTGGAAAGATCACCAACGTTATACTGAACATGTGATCCTTGGCTTTTAAAATCATCACCTAAGAAATCCTGTGA CATGCCCCCAACAGAAAACCCATCACGATATGTCTGGCTTGCCCCTTGAGTCATATTAGAAACAAATCCAGGCTGTGATAATGGACCACCCGGG GATGGCTGGCTATTTGGAGTTTCCATTGAAGGGAAGTTAAAGTTGGATCCCATGCCAGCACCTATCGGTTGCTGTTGCTGGTGTGGAAGATGAC CAGCATTACCCCTCCCAGCACTGAAACCCCGACTCCCTGGCTGAGGAACATGAGGAATACCTCCAACGGGTCCATGTATAGCTCCACGTGTAGG TATGGCATAAGGCTGAGGCCCGCCATGATAAGGTGGGATAGGCACACGGGGCATGGGATACGCAGCAGGATGCAGACCAGGTTTATGAGTACCA TTAGGAGGGCCAGAAGGCATGTACGAACCTCTAGAACGACTGTCTCTTCTATCAGCGCCTGCATTTGCTGAGGCAGCGGATCCAAAGCTGTCGT TAGGTACAATACCAGGCCCACCACCAAAGTAAAACCTTCGATCATTGTACATTTTTTTTGGCTTTTGAAATTGAACCATGCTCTGCTTCAAGTT GTTTAGAGGTCCTTCCACCAAACATTCATGCTCCTTATAGTGTGTGAGTAAGCCATTCCATAAGGGCTGTTTGCTAAGTACTTTAGGATTTCCA AGAATGACAATACCATACCGAGCACGAGTAAGTGCAACATTAAGCCTGCGTGGATCATTCAGAAACCCAATACCCTGATGTTCATTACTTCTGA CACATGACAAAATAATGTAATCTTTTTCCCTCCCTTGGAAAGAATCGACACTCGCAACCTCAATATCCTTGTAAAGCTGCTGCCTAAGTGCACC GTTTCTAGACATGTAGTTAACGATGTATGCACGCTGGCCTTCATATGGAGTTATAACCCCAATCTGACTTGGAACTACACCACTCCTTAAGAAA GTGGTCACCAGTTATTCAACATTTGCAGCCTCTGTCCTATTAAGATAGGACGTTCCACTAGCACTGATTTCTTCTTGTCCCATCTGCAATAAAT TTACAAGAAAGCCGTCAACATAAGAATACATATGAATCTGTATATTTCTTACCAACCATTATGTTACTAGAAGAAAATTTTAATTTGCAAAAAA GAGCAGGCAGAAGAGTTGCACACACCTGAACATAAAAGAACATGGGACGGTTTGGCACAGACCATGGAAAAATAATGCTTGTTGTTTGCCTTTC ATTTACAGTCGCAACATTTTGGAGAGTCCCTTCATAGAAAACACAATCCTATACTAGATTTTTAATTCGAAATCCTATACTAGCAAGTGGTATC AACTCTAATATCTACATTGAGCTAAAAATATGCAGTATTTTTACCAAGGAAACCCTTTACCCAAAAAAATATGCAGTAAGCACAAAATGTAACT TACAAGTCAATGGTTAAGCTACATCATGAAATATACCTGACCAAGTCTCAACCGATGGC |
Primers for UN71565 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | GAGCTTGGAGTTCAGTTCGG | 59.989 | 20 | CATGGGTCATGGTTCACAAG | 59.806 | 20 | 250 | 288 | 537 |
| 2 | GAGCTTGGAGTTCAGTTCGG | 59.989 | 20 | ATCTTCCCAGAGCCACTTCA | 59.803 | 20 | 187 | 288 | 474 |
| 3 | CGCTCTGCTCAAACTCAGTG | 59.922 | 20 | ATCTTCCCAGAGCCACTTCA | 59.803 | 20 | 274 | 201 | 474 |