Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN71518
CGTAAATCAGGAAGGAAGGCTTTTGAAATAGATTAAATGCTCACATTCAACTAAATGTGACAAAAATGTGGAGTTGTACAATTGCATCAACACA
GTTCGGACCAAGCCATGGCTATCAAGCGAATTGATTTTTTAGAACAGGTTGACTTTAACATGTATTATGTACATCTCCGAAAATATAAATGAAG
TTACAATTTTTTTTATCTTCCAAAAAGATTGTAGAAAATAAACGAAAGTGGTCACTTGGGAGGTCTGGTTCATCCCTCTGTGTCAATGTTATCA
TCACTCGTGGGAATTTGTCTTCTCTCTGGAGACATATTTGTGGAGGATGAACCTATCAAGCGGCGAACATTTGAGGCATCAGCTGATGTAGATG
GAGAAAAATTGTAAGCGAAAACCCCCATTGGGTGGTCAAACTTGCAACTTGGACCAAATTTGCATATTCCATAACGAGAATAGAAAATGCACAA
CGGCTCTCCCGGACGTAAAGGAAGCCCAATTGGACTCAGGTCACAGTCAGGCATGGGAATCGCCCTCTCTCTGGGGTGGTGAAATCTGCAAACT
GCACCAAACTTACAGTCTCCGGTCTTCATGTAAAATTGGCAATCAGGCTGACCAGGCCTCTCGGGGAATACATTCTCTGTTGGTAAAGCATAAT
AAGATGAATATGTTCCAGTTAGTGTTCCATTATCTGTTTCATACTGCCGTGAAGTTCCATAGATTTGATTGTTTCCAGCTGCTTGTTGTTGGTT
CTCTAATGATGAAAGTGAACCCAAAGAACCTCTGTAGGCACTCCATCCTGGAACAGAAACAACACCCTGAGGTAGTATCATTTGTGCATAATTT
GAAGGGGCTTGCCAATGCGGACTAGGAACATAGGAAGCACTAGGCAAGGACCAGTTTGTTGTTACTCCTGGGTATGACTGTTGACCAGGACTTG
TTGGCGACTGCACCGTAGGATATACTGAAGAACCACTAAATGCGACCATCATGTTAGATGGTTGAGGGTGGTGAAATTTACAAGTGTTTCCAAA
CTTGCATTGTCCGGTTCTTATAAAATAAGCACATTCAGGCTCATTCGGACGGAGTGGATATCCCAAAACATTTAGTGAAACTCGCCCTGCAATT
CCAGCCATTTCTCGAGGATGATGAAACTTGCATGTTGGTCCAAATTTGCAGGTACCCATCTTTAAGTAGTACTCACATTCAGGTTGTCCTGGTC
TTTCTGGATATTCTCCTCTCATTTTCGCAGTTGCAATAGCAAAGGCCGGTTCTGATGTAGTAAGAACAATCTGGCTCTCCTTCACGCACAGGAT
AAGGTCCTGACTCCATTGGTTCCCTTGATCTTAAGTTCAGTTGCCACAGTGTGTCTTCATCTAAAGGCTGAGACACTTGGGGTCGTGACATCGA
AATTTCGCTATGGTACAACATATTATCACCACTAATAATTCATCTCCATCATCCATCACTTCATCTCCATCAATAACATCACTCACAACATATA
TGTCTAGCTAATTATTGTACGAGTTAAGTGTGTGTGAGAGAGAAAGGTGTGTTAGTGTGTGAAACAGAATTTGTTTTAAAATTCAGTTACGATT
GATCAAAGTGTGTGTGTGTGTTTGTGTTTGTGGTTAGTTGTAAAAGAGGGAAGAAGAAGAA

Primers for UN71518 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1ACACTTGGGGTCGTGACATC 60.85120TTCCCTCTTTTACAACTAACCACA 59.13824262 13891650
2ACACTTGGGGTCGTGACATC 60.85120TCCCTCTTTTACAACTAACCACAA 59.13824261 13891649
3GACACTTGGGGTCGTGACAT 60.85120TTCCCTCTTTTACAACTAACCACA 59.13824263 13881650