Simple sequence repeat (SSR)
>UN71517 CGTAAATCAGGAAGGAAGGCTTTTGAAATAGATTAAATGCTCACATTCAACTAAATGTGACAAAAATGTGGAGTTGTACAATTGCATCAACACA GTTCGGACCAAGCCATGGCTATCAAGCGAATTGATTTTTTAGAACAGGTTGACTTTAACATGTATTATGTACATCTCCGAAAATATAAATGAAG TTACAATTTTTTTTATCTTCCAAAAAGATTGTAGAAAATAAACGAAAGTGGTCACTTGGGAGGTCTGGTTCATCCCTCTGTGTCAATGTTATCA TCACTCGTGGGAATTTGTCTTCTCTCTGGAGACATATTTGTGGAGGATGAACCTATCAAGCGGCGAACATTTGAGGCATCAGCTGATGTAGATG GAGAAAAATTGTAAGCGAAAACCCCCATTGGGTGGTCAAACTTGCAACTTGGACCAAATTTGCATATTCCATAACGAGAATAGAAAATGCACAA CGGCTCTCCCGGACGTAAAGGAAGCCCAATTGGACTCAGGTCACAGTCAGGCATGGGAATCGCCCTCTCTCTGGGGTGGTGAAATCTGCAAACT GCACCAAACTTACAGTCTCCGGTCTTCATGTAAAATTGGCAATCAGGCTGACCAGGCCTCTCGGGGAATACATTCTCTGTTGGTAAAGCATAAT AAGATGAATATGTTCCAGTTAGTGTTCCATTATCTGTTTCATACTGCCGTGAAGTTCCATAGATTTGATTGTTTCCAGCTGCTTGTTGTTGGTT CTCTAATGATGAAAGTGAACCCAAAGAACCTCTGTAGGCACTCCATCCTGGAACAGAAACAACACCCTGAGGTAGTATCATTTGTGCATAATTT GAAGGGGCTTGCCAATGCGGACTAGGAACATAGGAAGCACTAGGCAAGGACCAGTTTGTTGTTACTCCTGGGTATGACTGTTGACCAGGACTTG TTGGCGACTGCACCGTAGGATATACTGAAGAACCACTAAATGCGACCATCATGTTAGATGGTTGAGGGTGGTGAAATTTACAAGTGTTTCCAAA CTTGCATTGTCCGGTTCTTATAAAATAAGCACATTCAGGCTCATTCGGACGGAGTGGATATCCCAAAACATTTAGTGAAACTCGCCCTGCAATT CCAGCCATTTCTCGAGGATGATGAAACTTGCATGTTGGTCCAAATTTGCAGGTACCCATCTTTAAGTAGTACTCACATTCAGGTTGTCCTGGTC TTTCTGGATATTCTCCTCTCATTTTCGCAGTTGCAATAGCCAGTTTCCTGTTAGGAGGATGATTAAAACGACATGTTGCCCCAAACCTACAAAG GCCGGTTCTGATGTAGTAAGAACAATCTGGCTCTCCTTCACGCACAGGATAAGGTCCTGACTCCATTGGTTCCCTTGATCTTAAGTTCAGTTGC CACAGTGCATCTTCATCTAAAGGCTGAGACGACATCGAAATTTCGCTATGGTACAACATATTATCACCACTAATTCATCTCCATCATCCATCAC TTCATCTCCATCAATAACATCACTCACAACATATATGTCTAGCTAATTATTGTACGAGTTAAGTGTGTGTGAGAGAGAAAGGTGTGTTAGTGTG TGAAACAGAATTTGTTTTAAAATTCAGTTACGATTGATCAAAGTGTGTGTGTGTGTTTGTGTTTGTGGTTAGTTGTAAAAGAGGGAAGAAGAAG AA |
Primers for UN71517 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GGCTGAGACGACATCGAAAT | 60.226 | 20 | TCCCTCTTTTACAACTAACCACAA | 59.138 | 24 | 253 | 1432 | 1684 |
2 | GGCTGAGACGACATCGAAAT | 60.226 | 20 | TTCCCTCTTTTACAACTAACCACA | 59.138 | 24 | 254 | 1432 | 1685 |
3 | TTGCCACAGTGCATCTTCAT | 60.272 | 20 | TCCCTCTTTTACAACTAACCACAA | 59.138 | 24 | 278 | 1407 | 1684 |