Simple sequence repeat (SSR)
| >UN04014 CCTGATTAACACCACTCTCATTATAACAAAAACCGACCGTTTTCGTAATTACTTCAGGCGAAGTACTTACTTTCAGTGGACTATTGACCTCCTT ATCATCATCAACTTCAACTAGGAAAGACTCAGATACCCGCCTTTGATTAATCGACACAGAAAATAAAGACCCGGATGTTTCTTCTTGAACCAAC ACATCATCATCATCATCGTCGTCGTCGTCATCATCTTCATCATCATAAGCGACCTTTTGCTTTTTCCATTTGTAGGCTTGCTCCAAGATTTTCA AATTGGATGCTTGTGACTCTTCTGGGAAGAGGTAATCTATGTACTCCTCGTACCCAGCAGGACCGTCATCAATTTCTATTTGCCTTCTCTTCTT CAGTTTCTTGGGCAGCTTAACACGGACCAATTCTATGTCACCCAACTCACCAAAACCACTCTCCATGTTCAACCATTCTTCTAGTAACATGGCC CTCTCCTCTTTCAGCTCAGGAGCTGATGTTCTGTAGTAGCTTACTGCATTTTCAAATACCCTTCTGGCATTTTTAATGCACTGTTGCCTCTGTT CTTTAAGCACGTCTTCAGGCAGCTCTTCTTGTTGTTCTACCTCTTCCATGGCAGATGCTTCAAACTTCGCATAGCTGATCCACACCTTCAAATG CTTCGTGCGATCCAAAAGCCTCTCATACAACTGCCGAGTCCTTTCAAATTCCCTTTCTGCTATCTCAAAGTCAATGTATGCCTTCCACAATAAT TCTGGCATGTCTAGTGCAGGTTGCGCAATTGCAAGCTCAAAAATGGCTCGGGCACGCTCAGTCTCCATTAAAGATCTTTCCAACTCAGCATACT TGCTCCATGCGTAGCAATTCTCAGGTGACCACTCCAAATACTTTTCGTATAGCTTCCGACAACGGTCCATGTTACCAAGCTGCAGCTCGATCTC AATATACTTCTTGAAAATCTTATCTTTAGGAGCAATCCCAATTGCATTCCCAAGAACTGCACGTGCACCCGAGAGATTTAACTGCCTGATTTCA AACTGGGCAGCCAATAACCATACTTTTGCAAAAGAGAACTTCTTGTGAGGAATTAGCTTTAAGCACTCATTATACACATCCCTGGTTTGTTGAA CATCTTGTGCATCAAGCTCTTCATACAAAGCATAATTAATCCATAAGTAAATGTATCGTTGCCAATATCTTTTCATTCATCCGCTGGAGGTACA TTAGAAATTGCTCTCTCATAAACCTCTCGGATCCTCTGTTTGTTCCCCACACTCTCCTCTAGTCGTATATAATCAAACCATGAATCATAATTCA GCGGATTCTTTCTAACTTCCTCCTCGTATTGAAACCTTCTTTTCCCAACAATTGCATCTTCAATGCCCTCTCGATCACCGTACTGCTTCTCGAA AGCAACAAACTTTCTGTATAGATCCTCAGCCCGCCCCTTCGGTATATGGTCTAGAGCAAATTTATAGATGCATCTTGCTCTCTCGGTTTCTTTA CATTTCTCTTCAAATTCAGCAAACGCAACAAATAAAGTCTCTGCCTCTTCATCGTCTGCTAGCTTATCGACTGCCCTTTCATAACAGTTCCTGG CTCGGGCAATCTCCCCGTTTTTCATCTCAAATTTGGCAAAGCGAATCCAAGCACCGACTTTCGGCAAGCATTGCACGAATCTCTCGTAGATAGC TCTAGCTCGCTCAATCTCGTTGTATCTAAGCTCAAACTTGATATACGAAAGCCATGCTTGCTGGTCGGGCTCCCAGCTCATCCACCTTTCAAAA ATTTGTCTGGCACCTGCAATGTTGCCTAGCATCTCCTCCATATGAATATACTTATACCACAACTGATCAACCCTCGGCAACAACGTAACCGCCC TATCCCACACATTCCGCGCATGATTAATAAACTTATTCTTCATTTCCACATCAGCATACTTCAACCACATTGTATGATCTCTATAATCCACATC CAACGCCCGTTCCCAAACCGACCTAGCGCGGTTAAAATCCTTCTGACTCTCCTCCCATTTCGCGTACTTTACCCAAACAGATTTATTCCACCTC ACGCGGCGTATCAAGTCTTCGAATTCTTTTCGCTTTCGGAGACGGTAGTCTGCGAGTTCTGTGGGGTCGGTTATTTTTTGTTTGGGAGGGCGGA TTTCGGCTTCTTGGCGCTCCCGGGCTTCGCGAAGGATTTGTTCGGCTGTGATTTGGACAGGGGCGGGGGGTTT |
Primers for UN04014 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | GACTCAGATACCCGCCTTTG | 59.694 | 20 | AAGCTGCCCAAGAAACTGAA | 59.993 | 20 | 275 | 120 | 394 |
| 2 | ACTCAGATACCCGCCTTTGA | 59.694 | 20 | AAGCTGCCCAAGAAACTGAA | 59.993 | 20 | 274 | 121 | 394 |
| 3 | TCAGATACCCGCCTTTGATT | 59.528 | 20 | AAGCTGCCCAAGAAACTGAA | 59.993 | 20 | 272 | 123 | 394 |