Simple sequence repeat (SSR)
>UN70654 TTTTTTTTGGGAAATCCATCATTAACTAGCAAATGCAAATAACAATATAGCTTCAGAAACATATTCAGGCACATAAAACCAAATACATTCTTTT ACCAACACATTAGTTCTCAGATTGATTGTCAACAAGTACATAGGAGGCTCCAGGTGAAATCAAGGCTGCTTAGTTCATTAAAATCCAACACCAC GAAATCTTTTAACTTAAGGAAATTTAAAGCCCCAATAACAAAGCAACTAACTATTCCACTTCTTGAAGATAGTCTTCAATCTGAGCTGCAGTTA GAACTCTGAATGTTCTGTCAGCCTCAATAACACCAATCTCAATGTTTTTGCCAGATATTTGTCCTTCAAATCCCTCCTTCAATGTTAAAATAGC TGTGTGTATCGCATCCTCAAGCTCCATATCATCAGTGTACCTCTTTTCTAAAAATGTCTTTGCATTAGACACATTCTTTCCCATGGCCGAAGCT TTCCAGGAGAAATAAGAACCTGAGGGGTCCACCTGATAAAGTTGGGGACCTTTGTCATCATAACCAGCAACAAGGAGTGAAACACCAAAAGGCC GTACACCACCAGACTGAGTAAACTCTTGCATAACAGCCGCGGTTTCCCTTACAAGTTGTGTAACAGGGATGGGCTCTTTGTATAGCCGATGGTA CTGCTCTGCCTGCTTCCTACTCTTCCTGACTAGAACTCGAGAATCAGGCCCCATTCCACTGTATACAACTCCTATATTGGGAGTCAAGATCTGG ATCTTTTGCACAGATGTCTCGTCGACTAAAATGGATGGAAGCTTCTTTTCCGTTGCAATCACGACCCCATTAGAAGTTATTAGAAGAAGAAGAA GAAGATCCACGGCGGACCACGGCGGCGATTACAGATTCACGGCGGC |
Primers for UN70654 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | ATGGTACTGCTCTGCCTGCT | 60.043 | 20 | CGCCGTGAATCTGTAATCG | 60.227 | 19 | 238 | 653 | 890 |
2 | ATGGTACTGCTCTGCCTGCT | 60.043 | 20 | CGTGAATCTGTAATCGCCG | 60.227 | 19 | 235 | 653 | 887 |
3 | TAACAGGGATGGGCTCTTTG | 60.066 | 20 | CGCCGTGAATCTGTAATCG | 60.227 | 19 | 266 | 625 | 890 |