Simple sequence repeat (SSR)
>UN70646 CCGATCATTCCTTGGATCAATCTTGAAGTTCTTTTGATTTATAATAAGGATACGGTCATCGTAGTCCTATGTATGATCCCGCATAAATTATACA AACTCATCATGATAAATCATACACCCAAACAAATTTCTGATAATTATGACGATTTAAATGAAGACTTTCAGCATCGACGATTATGTTCCTGAAC TGCAGCAGAAGCATCCAATCTAAGCAAAAACTTCTGAATCAATTTGCTCAATATTTGGGAAGATTTCTCTAAGAGTGGTCACATAGTTTGGCAA CTTCGCACAGGGATTGCGCTCAAGGTAGATAGTGGTGAGCTTCTCTCTCGAACCAGAAACCGCCTCAGCGATGCCATCTAATGTTGCTAGCTGG TTGTCATTGAACCATAGGTCTTCTAAGCATGTCAGTTTCTCAATATCCTCGACTGCTGCAAGCTTATTTGAGGAAACATCCAAAACCCGCAGGT TAGCTAACGTTGATAGGCCTTCCATTTTCGCAATACCATTATGGCTCAAATATAGTTCTTCTAAGGCAACACATTCCTCTAATCCTTTCATAGA AGTTAGGCGATTGCTTTGCAAACTGAGCTTCTTGATGCATCTTAATCCACATAAGTTGATGGATTTTATACGATTGCGACCTAACCATAGCTCC TGTAAATTTGTCAAGTTCTGCAGATTCTCGATCACCCGTAATCTGTTGGAACCAAGTTCAAGAATTTGAAGTTCATATAAGTGTTCAATCTCCT CAATCTTGGTAACTTCGTTTTTAGAAACATAGAGTTCCTTGAGTGTGCTTGATGCCTTTGACAGTCCACTCATTGATGTGATTTCATTGAAAGA AACATCAAATACCAAAAGTGTTTTAAATATGCTAACATCAGGAATAGTCTTCAGCTGGTTGTCCCTGAGAACGAACTCCTCGAGACCAGAAATA TTGTTCCATTTCGAAATCGGTTCAATACCGGAATCAGTAAAGAGGTTTTGACGAAGAGAGAGCTTTTTAAGATGGGTTAAAGTGGAGATACGTG AATCGAGCTTGGTTAAGCGATTAGCAGTTAAATCAATTTCGGTGAGAGTGGGTGGGAAGTCGATTGAGTCGAGATCATGGAGCTGGTAGCTGCT GGCGTCGAGAAGTGTTAGCGGTGAAGATTCGTCCATTGGGTGATCGTTGGTTGTTGTTGTTGTTGATGATGGTTCGATTGACATTTTGGTGTTT TTGAAACAAAGCCCTAGAA |
Primers for UN70646 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GAATCGAGCTTGGTTAAGCG | 59.982 | 20 | CCAAAATGTCAATCGAACCA | 59.371 | 20 | 184 | 1034 | 1217 |
2 | AATTTCGGTGAGAGTGGGTG | 59.966 | 20 | CCAAAATGTCAATCGAACCA | 59.371 | 20 | 149 | 1069 | 1217 |
3 | CAATTTCGGTGAGAGTGGGT | 59.966 | 20 | CCAAAATGTCAATCGAACCA | 59.371 | 20 | 150 | 1068 | 1217 |