Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN70204
TTTTTAAAGAAAATATACTCATGGCTATTATATTGAAAACCTCGGATATCGTTTAAATTATCTTTCTATGAAAAAGAAAGGGAGAAACTAAAAT
AAATAAGATGTGTATGGGACAAAGGGTAGTAGCATGATACAGAGTGGATCTTCCCAACAGATGGCGCTCTATCAATCTACTGTTACAATTTTTT
TAGCTTTTGTCCATCATTGCTTTCTCTTTACTTCTATCTTCGGTTTTCCACCAAACCTAAAATGATCAACGTCTAGTTCGAGGCTTGCACCGAA
ATTCAGCCAAGAGTGCAATGTGATCAGATGACCATTCAGGAGAAGGAAGTGCCGTATCTTTCCTCAAGCTATCCTCCTCCAGTAATTCCAACAA
CGATTCCACTGTCAAGGTGTCCGCTGAGTAAAATATATAATCGAGTGTACCAATGAAGTCCCGCGTGCAATTTGTAAATAGAGGTTCATTTGTA
GCAGGATCCACTCTCCTCTTTTGTTGCTCATAACCAAGATTAGCTCCAATTCTTGCAAAAGATGAGTAGGCACTAACCAAAGGCAGGGTGTGAG
TCAATTTAGTAGCCGGTCTCAGAATTCCAAGAGGGTCTACGGCTAAATCCGGATGCATTGGATCAACTTTCCCGATTGCTAAAAGTGCATGAGG
AGCACTTCCAGGAACTGAATTAAAATCCCCACAGACTAACATTGGTATATCCGCACTCGCAGCTATCTTTTCCAAACCTTTCAACAAAGTATGA
ACCTGCCATAGTTTGACATCCTTTAAATCTTGTTGAACATTCACATGCGTATTTGCCACACAAACAAGTTGTCTCTTTCCTGGATTATCAACAC
CGTGGTTACTGAATTTCGCTTCTAGAACAACGATTAGAGCAACATTATCCTTGACCAACCGATTTAAAGCGGTTTTCTTCTGAGCACTAGGAAC
CAAAGCATCAGTTAAAGATTGTGCAGCTTTATTAAACTCAACCTCGTATTTTTTGACATGAGAAAATCTATCTCTGCGAAAGAATGTGGCACAT
CCATCAATAGTCATTATACTTCCGTTAAAAACCTCTGCTGTTTTTTTCTTATATAGAGCCTGATAGCCATGTTTGTCCAGCTCAGGAGCAAAAA
ACTCATCAAAATGATCGCTTTGAACCTCTTGAAGACAAACAATGTCAGCTCGGTAGCCAACTATTTCCCGTAACAAATTCTGTCTACGGTAAGG
CCAAGAAAGGGCCCATGACGGACAATAACCATATAAATCACTCGTAGCATACGTATCCGCTAAAATATTATACGAGAGCACAGTAAAAGTCCCA
TTAGATGAAAGACGTCCATCTAAATCCAGATGCCCCATGACATCAGAATTGCTAACCGAGATCAATTTTCGTGGACTCGGGGATGGAGCCGGAA
TCACACGTGATGTCAATATGGTATTCGTGTGTCCAACGGGTGATTTCGTTTCTACATCAACCACCACACATTCAAACTTGAGAACATGACCGAT
GTCATCAGCTGTTGGTGTATAAGTTTTAGACCGACCAACTTCAAACCATGTTTCACCACCGCTCCTCTGTGTCACAGCTGCAGGATATAAGGGT
GTTGCACCATTTGCAAGGCTTGGAAGAGACTGTGAGCTTGATAAGCTTTGATTATTATTACTATTGTTGTTATTATTATTATTAAATCTTCCGA
ATATCTCTTCTTCTTCATTTCCATTTTCATTAACAGCACTGGCAGCACGCTCATGTAGAACACGATGGTGTTGCCATGCATCAGAAAAACATTT
TGGAGTGCAATGGTAGCTTTTATTGACAGGTATTTTGGCTTTTACACACCCTAAGCACTGCAAAGTGGCTT

Primers for UN70204 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1GCAAGGCTTGGAAGAGACTG 60.13420GCTGCCAGTGCTGTTAATGA 60.01920128 16111738
2TGCAAGGCTTGGAAGAGACT 60.13420GCTGCCAGTGCTGTTAATGA 60.01920129 16101738
3GCAAGGCTTGGAAGAGACTG 60.13420TTTGCAGTGCTTAGGGTGTG 59.90420240 16111850