Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN70010
TGGCGGGTTAAAAAAGTTAAAGAAGCTTTCACAATTCTCTGTTTTTGTAATTGGTGGCTTGGGGCTTCTGGCACCCTTCTTAGGTTTCTTCCTC
AGAACCTTCTGGGTCAAATTTTTCCCTGGATACCAGTCGATCTCCGTCCCAACTGCTTTCTCTAAGATATGTTCCTCCTCATTGATCATCTCAT
AAGTTTTCGTCAGCACAGAGTTCTTAAAGTAAGGATTGGTGTCAAAGAAGAATTCAAGCTTAAAACCCTTGGCGCCAGCAACTCTAGACCACTT
AACATCTTTGAGATACTGCAGAGCTCCTTCATCAGATTCGGAAATCTCGTCAGCTAGCACATCATTAGACTTCATTGCAGTGAGCCAGAAACTT
GGCACGCCTTTATCTCCTGTTGTCTCGTTTTCCTTATCCACGACATTATCATTTGATACTCCTTCAACTTCAGTCAGACCATTCACTATTTCAT
ATCTCTTAGCATACAGCGGCTCATACAGCTTCAAATATTTTGCTTCCAGTTCTGCCTTTTCTTCCAAATACTTGGCCTCCAACTCATCATGTTG
ACTCTGAAGATCCTTAAGAACAGCAACACGATGCCTAACGTTAGCCGAAAGTGTGTCCAAGATATCCGGATGTTGTCCACTCAAATTGTTAAGC
TTGTTCTTGAGGACATTAACAAGGCCAGCACGATCTTCAGCGCTAAGAGCAGCAGATAGATCTGTCATGTTGAATTCAGCTTGTTGTTGTTGTT
GTTG
TGGATTATCACTCATTTTAACTAATTGATCTAACTCAATTAAAACCCCTAACAAAAGTGTGTGTGAGAGAGATTAAATTAGGGCAAAATG
ATGATGGAGGTGCCAACTGGTGGTACTTTTTGTGTGCTGTGCTGGATTTCAGTGTTAATTTGTTTGTTGAAACGGTTTTATTATTAGATTATTC
AAGTG

Primers for UN70010 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1GCCGAAAGTGTGTCCAAGAT 60.11920CTCCATCATCATTTTGCCCT 59.89420248 608855
2GAACAGCAACACGATGCCTA 59.87120CTCCATCATCATTTTGCCCT 59.89420274 582855
3GCCGAAAGTGTGTCCAAGAT 60.11920ACCTCCATCATCATTTTGCC 59.75620250 608857