Simple sequence repeat (SSR)
>UN69586 CATTTAAACGCGCTAGAGAATGCTTAGTGGCTTCTTTGCCCAGAGAGGTACCCGCGAAAGAAGCAACGGAGTCACACACTTTATCCCACTCCAA CACTTTATTATTATTTTCAACTTGTTCTTCTTCTTCTTCTAGTAGTGGTACATATGAATTTGAGTTATTAAAAAAACAAGATGTCGGCTTCTTG TTGTTGTTATTCAATAGTCTTGTGGGTATTGGTTTTATCTTGATCCTCAAGGATGATGATGATGAAATACTGATACTAACTGAGGAGGAGGAGG GGACTTGACACCAGCAGCAGGAGGAGAAACAGGAGATCATCATCATCATCAAACAATTACTATATATATTATATGTCATTTAAAACGTCGTCGT ACGATGAACAGTACATGCTACAGTACATGGGCCGATGAACAGTACATGCTCCATTACATCCGGCCCTGTTGCTATATTTAGTGCCCGAGAAAAA TGAAACCCACGAAGCTAAAACAAAATCCGGCCCATTTAATCCAACAACCCAAACCCAAACCCAAAACAAAAGACGAGAGA |
Primers for UN69586 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CTTAGTGGCTTCTTTGCCCA | 60.378 | 20 | GTGTCAAGTCCCCTCCTCCT | 60.504 | 20 | 271 | 23 | 293 |
2 | TTAGTGGCTTCTTTGCCCAG | 60.378 | 20 | GTGTCAAGTCCCCTCCTCCT | 60.504 | 20 | 270 | 24 | 293 |
3 | TTAGTGGCTTCTTTGCCCAG | 60.378 | 20 | CCCCTCCTCCTCCTCAGTTA | 60.577 | 20 | 261 | 24 | 284 |