Simple sequence repeat (SSR)
>UN03755 CACAGGAAAAACACGGATGCTTAGAGCTTGCAAACACATATGCTCACTTTCTGAGCGGTCTTGAGTCACTGATGTGTTTGAGTTTGACTTTTCA TGCTTTAAATTCAAAATAAACATGGGCTTGTTTTTCCGAAGTGCATGCTCTGTCACAGTGTTAAGATGCTTGAACTGTCGAAAGAGTATAGAAA GTTCCTCGGTTTCTACTTGACAACCAGGTGAGCTCTTGGCATCTTCAGCTATGTCACTGTGATCCATTCTCTCAACCTCAACACCCTCATTTTC TGAAAGATATCCATCGGGTACAAAAAACCCATCCTCGCTTTCATCTTCATCATCAGCTTTTGACAAATTATCGTCCATGGTTTCATCTTCCTCT TCCTTCTCACAATCGGATAAGCTTTCCCCAGGTTCCTCCTCTTCCCATTCTTCATCACTATCAATCTCATAATCCAGGTCTGGATCCTTGACAA GAGGGCAACAACCTCTAACAAGCTCACTTTTTCTGGGCCAATAACCATAAAATGCGGGTCTGTGGCTCTTATCAAACTGTATCAACTGCTTGCG CCGTCTCAACTTCTGACTACAGTGACCCAATCGATGCCAAGAATCCAAGTGTACCTTCCGTAAATCCGTGACATCAAATTCATCTTTTTGTGAA AGAGCATGGTCCATAGACTGAGTAACCGACTCAGGCACTTGCACTGCTTGCTTAGGTAAGATGTCGGTAACACATGTTTTAAGTTTTAACTATG GGCTGGTTAACCTGCGTAGGTGATCTACTTTTGCTCTTTTTAAGGAATCTCTCCAGCACTGATGCTTGTTTTTGCAAAGCAAGTTGCTTTTTTT GTTCAGCTTCTTCCTTCTCTCGACGCCGCTGTTCTTTCTCCTCTTTCTCAGCTTCCTCTTGTTGCTTTTTCAACTGTTTTTTCATTTCAATCTC ACGACGTTTTTCCTCTTTTTCTGCCTCTTCTTGCAACCGCTTCTGCTCTTTTTCCGCATAAAAGGCACCTGGTCCTTCAACTGGATTCTTCCCA CCATAGTCATGCACAAAACTGTCGGCACAGATATATACATCCTCCATGCTTCCACGGGAACCCATGTCTGCCCATGCTCCTGAGCGGAGAAGTG GTAGAAATTCAGATTTACAATCTTCCGGATTCAATATTGGTCCAACAGGTTCATCTGCAATCCTTGTCCTCACCAGAGAGGGATGGCGGACGAA AAAGTTGTTGGAATGAGCGGTTAGTGGATTGGGTGGTTTACCCTCAGACGATGAACTACAATTATTATTATTAATTCCTCCTTCCATTGTCATC CTTATTTATCATTACTTCTTCTTCTTCTTCTATTTATTCTTCTTTTCCCTTATTTTATAACTCGAGATCAATCGATGGATAGATGGATCTAGGG TTTTATTTA |
Primers for UN03755 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GGTGGTTTACCCTCAGACGA | 59.966 | 20 | CCCTAGATCCATCTATCCATCG | 59.777 | 22 | 157 | 1254 | 1410 |
2 | AAAGTTGTTGGAATGAGCGG | 60.11 | 20 | CCCTAGATCCATCTATCCATCG | 59.777 | 22 | 188 | 1223 | 1410 |
3 | TCCTCCTTCCATTGTCATCC | 59.862 | 20 | CCCTAGATCCATCTATCCATCG | 59.777 | 22 | 113 | 1298 | 1410 |