Simple sequence repeat (SSR)
>UN69456 TTGGTAAAGCTTCACTTTGTTCACGGATGTCAGATGAAAAATAAAATTACAAAGATAGCAATAGAATCGTTAATACATTTGGAATGCCAAAACC ACATTCACCACTCTGGTATTTGCCTACTCTATGTGGTTGCTCACAGCTATAACAATACATCATGCTAAAGAAAAACATAAAATTAAAGCATAGA AATCAATTCTTCTGTCACAGTTTTGGTTCAACTCAATCATGCAGTTCCGGAGATACCCTTAAACCCTTATCTAGTCTTGGCAAAACGGGGATTA AAACTATGATTTGTACTTTGAAATGTGATGTTCATATGATAATAAGAACTTACAAAGGATGCAACTGCGTCTTCCATCTAAGTGGAACAGCAGC CCGCCTTCTTCAATGCTGATACATCATCTTTGTTGCCAACATTAATAGTCTGTCCCTTTGGCAAAGCACCAGGATCTTCTCCAACATCAAGAGC TTTTCTGCTGACAACTTGGTGGATTTGAGTAAGGACTTCTGTGAAGGCGTTTTCAACATTCAATGATTCAAGGGCAGATGTTTCCATAAAATAA GTGTTCTCTTTTTCAGCAAATGTTTTGGCATCTTCAGTTGTCACAGCCCTTAAATGGCGCAGATCAGATTTGTTTCCTACAAGCATGATGACAA TGTTGGAATCTGTATGGTCACGGAGCTCCTTTAACCACCTCTCTACATTCTCAAAAGTGACATGTCGAGTTACATCATAGACAAGCAATGCACC AACAGCACCTCGGTAGTAAGCACTTGTAATTGCACGGTATCGTTCTTGACCAGCAGTATCCCAAATCTGAGCCTTAACAATTTTATCATCAACA CGAATACTTCTAGTAGCAAATTCAACGCCAATGGTTGACTTTGACTCTAGATTAAACTCATTTTTAGCAAATCGAGATAGCAGATTTGATTTGC CAACGCCTGAGTCGCCGATCAGGACTAGCTTGAAGAGGTAGTCGTAGTCATCGTCGGCTCTGTAAGCCGCCATTGGTTTATCAGATGAATGTGT TGTAGGGTTTATGTGAATCAAGATCTGTTTTTGAGTTGTTGAATTTGATAAGATTGATTGATTGATTGATTCACGAGATTTGGGAGAGAAAGAG AGGCGCGTACGCGTTTCGAAATA |
Primers for UN69456 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TAAGCCGCCATTGGTTTATC | 59.928 | 20 | TACGCGCCTCTCTTTCTCTC | 59.859 | 20 | 135 | 1003 | 1137 |
2 | AGTCGTAGTCATCGTCGGCT | 59.898 | 20 | TACGCGCCTCTCTTTCTCTC | 59.859 | 20 | 158 | 980 | 1137 |
3 | TAGCAAATTCAACGCCAATG | 59.702 | 20 | TACGCGCCTCTCTTTCTCTC | 59.859 | 20 | 278 | 860 | 1137 |