Simple sequence repeat (SSR)
>UN03706 CCAGAAGCAACAATACTCTTGGCTGCTTGCCTAACGATGTAAGCACCACTCCTGTCGACCTTGGTTGGGTCTTTGCCGGAGAAAGCACCACCAC CGTGGGCTCCCCATCCTCCATAGGTATCGATAATAATCTTCCTTCCGGTAAGACCTGCATCTCCATGAGGACCACCAATCACGAAACGACCTGA GGGGTTCAAGTGGAAGATGGTGTTGTCATCAAGGTACTGAGCTGGGATGACTGGCTTGATGACATGCTCCTTAAGGTCAGCAGCAATTTGGTCG TTGGTGACAGTCTCGTCATGCTGGGTGGAGATAAGAACGGTGTGAACTCTGGTAGGAACCATAGCACCGTTCTCGTTGATGTACTCAACGGTGA CTTGGGTCTTACCGTCAGGCCTCAACCATGGGCAAGTGTTGTTCTTCCTCACTTCAGTAAGCTTAGCACCAAGCTTAGTTGCGAGCACATGGGT AAGAGGCATAAGCTCGGGTGTCTCATCAGTAGCATACCCAAACATGTGACCTTGGTCACCAGCACCGATCTCCTCGGGCTTCTTGGTCAAATGA CCGTGGACACCCTGGGCAATGTCGGGACTCTGTTGCTCAATGTTGACCAAGACCTTGCAGTTGTCAGCGTCAAGACCGACATCAGCAGATGTGA ATCCAATTTCTCTGCAGGTATCACGGACAATCTTCTCGTAGTCCACGGTAGCCTTGGTGGTGATCTCACCGAAAACCATGACCATGTTGGTCTT GGTGCAGGTCTCACAAGCGACCTTGCTCTCGGGATCTTGTTCTAGGCAAGCATCAAGGATGGCGTCAGAGACTTGATCGCAAAGCTTGTCTGGG TGTCCCTCATTGACAGACTCAGATGTGAATAGGAAAGTCTCTGCCATATCTGAATGTTGGGTTTAGAATGAAATATTCAGATCCGGAGAGAGAG AGATGATGGGTTTTTAGGAGGAGGATGGTTTGGTTTGTATGAGAGT |
Primers for UN03706 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CTTGTCTGGGTGTCCCTCAT | 59.962 | 20 | AAACCAAACCATCCTCCTCC | 60.169 | 20 | 140 | 837 | 976 |
2 | TGCTCTCGGGATCTTGTTCT | 59.95 | 20 | AAACCAAACCATCCTCCTCC | 60.169 | 20 | 201 | 776 | 976 |
3 | CTTGTCTGGGTGTCCCTCAT | 59.962 | 20 | AACCAAACCATCCTCCTCCT | 59.795 | 20 | 139 | 837 | 975 |