Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN69294
ACCATGTCGAAAATTGTGAAAGGATACAGTTTTCTGCATCATTCATCGCCTATATATTATGTACAAAGTATTACAACAGATTACCTACAGAGGC
CGTAACAGGGAATAATCTTCGAGCAATTCTCGCTCTGTAAGAGTATCATTTTCGTTTTGTGGGGTCCATAACACCTCGACTGCCATGATTCTGC
TTGAAGGGATAGAAGCCAGCTTTTGCAACGCTTCCTTCAATTGAGCACTACTATTGATGGGCGGCAATTTATGAACGCCTCTGGCAGCCACGAT
AATGGTAATCACAATATACTCATTACGGAACCCATTAGATCTCTGACTTGTACTTTGTTTTCTGATGTTGTTGACATTGACCAAAGTCTCCTCA
TCAAACTTACCCCTTTCTTCAATAGAAAGATTATTAAAACGTTTCTCACCTTCCTCTATGCTCCTCTTCACATCCACAGAGGAATAACCAGAAA
TGCAATAATCAGGATGTCGAAGTAGAGATAGTATTGTTTCTTGTAATACAAAGCTCAACCCCTCAGGGGTGGATGTATCAGCTGCCTCAGCAAT
CCGATTGAGATCCCTTTGTAGTTGTCTACCCATACCCAACAACCCAACCTGAAGCTTACAAACACTAGTCTTATCACTAGCAGTAAGCACACTG
CCCTCATCACCATCAGCCCTATCCGACAAGAACCCCGACACCAAAACAAACGCAGCAAAACCCGCCAATACAAACACAAAACTCGACCCAAATC
CAAATCCAACAGCAGGACCCACAAAACCACCCCCAAACAAACTCGGACCATAATACGGAGCCGTAAACCCCACCTCAGGCCCCCTACTCCTCAT
ACTAGTATAACTCCTAGAACTCGAACTCGAACCAGAACTCGAAAAAGACCTCCCACCCATTCTCCCACCTGAACCAGCAGCCATAGCAACATTA
CTTTGATCACACATCAACAGTAAACCCAACAACACCCCTGTGATAATGGGTTTTTGCAAAACCTTAAAAAGATGCTTAACTGAAGCTAAAAAGA
GCTCATTTAAATCAGTTTTGGTGTTGGGTTGATTTGATCTTTTTGGGTTTATGGAGCATTTAATGTTGGTTTTGGAAATGGGTTTTGTTTCTTT
TAGAAAAAGATTATGTCTTTGAGTGTTGGGTATGATAAAATTGCTAAAAAGATTGGTTCTTTTGGGGAATTGGGGGTTTATGAAGCACTTAAGA
GTGAAACTAGAGGTATGGGTTTGTATGAGGAAAGGGGTAGCTGCCATTAGAGGATGATGATGATGATGAAGAAGAAGATGATCTGAATATGATT
GATGTTGTTGTGGTAAAGAAATGAATGTAACAGTAGGGACTACTGGATAATGGAAAACTGTG

Primers for UN69294 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1TGTTGGTTTTGGAAATGGGT 60.06620TCTTTACCACAACAACATCAATCA 59.42424238 10981335
2TGTTGGTTTTGGAAATGGGT 60.06620TTTTCCATTATCCAGTAGTCCC 57.13222276 10981373
3TGTTGGTTTTGGAAATGGGT 60.06620TTTTCCATTATCCAGTAGTCCCT 58.10523276 10981373