Simple sequence repeat (SSR)
>UN69294 ACCATGTCGAAAATTGTGAAAGGATACAGTTTTCTGCATCATTCATCGCCTATATATTATGTACAAAGTATTACAACAGATTACCTACAGAGGC CGTAACAGGGAATAATCTTCGAGCAATTCTCGCTCTGTAAGAGTATCATTTTCGTTTTGTGGGGTCCATAACACCTCGACTGCCATGATTCTGC TTGAAGGGATAGAAGCCAGCTTTTGCAACGCTTCCTTCAATTGAGCACTACTATTGATGGGCGGCAATTTATGAACGCCTCTGGCAGCCACGAT AATGGTAATCACAATATACTCATTACGGAACCCATTAGATCTCTGACTTGTACTTTGTTTTCTGATGTTGTTGACATTGACCAAAGTCTCCTCA TCAAACTTACCCCTTTCTTCAATAGAAAGATTATTAAAACGTTTCTCACCTTCCTCTATGCTCCTCTTCACATCCACAGAGGAATAACCAGAAA TGCAATAATCAGGATGTCGAAGTAGAGATAGTATTGTTTCTTGTAATACAAAGCTCAACCCCTCAGGGGTGGATGTATCAGCTGCCTCAGCAAT CCGATTGAGATCCCTTTGTAGTTGTCTACCCATACCCAACAACCCAACCTGAAGCTTACAAACACTAGTCTTATCACTAGCAGTAAGCACACTG CCCTCATCACCATCAGCCCTATCCGACAAGAACCCCGACACCAAAACAAACGCAGCAAAACCCGCCAATACAAACACAAAACTCGACCCAAATC CAAATCCAACAGCAGGACCCACAAAACCACCCCCAAACAAACTCGGACCATAATACGGAGCCGTAAACCCCACCTCAGGCCCCCTACTCCTCAT ACTAGTATAACTCCTAGAACTCGAACTCGAACCAGAACTCGAAAAAGACCTCCCACCCATTCTCCCACCTGAACCAGCAGCCATAGCAACATTA CTTTGATCACACATCAACAGTAAACCCAACAACACCCCTGTGATAATGGGTTTTTGCAAAACCTTAAAAAGATGCTTAACTGAAGCTAAAAAGA GCTCATTTAAATCAGTTTTGGTGTTGGGTTGATTTGATCTTTTTGGGTTTATGGAGCATTTAATGTTGGTTTTGGAAATGGGTTTTGTTTCTTT TAGAAAAAGATTATGTCTTTGAGTGTTGGGTATGATAAAATTGCTAAAAAGATTGGTTCTTTTGGGGAATTGGGGGTTTATGAAGCACTTAAGA GTGAAACTAGAGGTATGGGTTTGTATGAGGAAAGGGGTAGCTGCCATTAGAGGATGATGATGATGATGAAGAAGAAGATGATCTGAATATGATT GATGTTGTTGTGGTAAAGAAATGAATGTAACAGTAGGGACTACTGGATAATGGAAAACTGTG |
Primers for UN69294 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TGTTGGTTTTGGAAATGGGT | 60.066 | 20 | TCTTTACCACAACAACATCAATCA | 59.424 | 24 | 238 | 1098 | 1335 |
2 | TGTTGGTTTTGGAAATGGGT | 60.066 | 20 | TTTTCCATTATCCAGTAGTCCC | 57.132 | 22 | 276 | 1098 | 1373 |
3 | TGTTGGTTTTGGAAATGGGT | 60.066 | 20 | TTTTCCATTATCCAGTAGTCCCT | 58.105 | 23 | 276 | 1098 | 1373 |