Simple sequence repeat (SSR)
>UN69150 ATCTTTGTACGCCATCATTCCAGCCATTTGAAAAGTAAAACATGAACAACCACAACATAGCAATTATCTATTTCGAGTGCACAACATGACGACA ACACATCCAAAGCACAAAATCAGTTGATGGTTCACAAGTTCACTACCGTTCTCTAAAATACCTGGATCCATTTTATTTAATATGGATCACGAGA CACACCCCTGCGCTCATCTCGCCCCCTGTCCACATAAGCATCTCGCCTATACTCTTTAGCTGGTGGAGACCTAATAGGAGATCTAATGGGAGAC CTGCTCCTTTGTCTCTCATCACGAATCCATCGTCCACCACGCCCCGCTGGAGGTGGTGAAGGAAGTCCAGGTGGAGATAGTGGTGGCCGCCTGT CGAACATTTTTCTGTCTCTTCCCCACTCCAGTGGCGCCATTGGTCTATCAAACCTGTTTCTGTCCCTCATGTCATCTTCAAAGTAGTCAGGCCT GTGATGATCCCTGTTTGGAAACCGCCCTTCATGCCTGGGGTGATGCGGACCTGCAATCCCAAAATCTCTAGGACCATCTCTACCAAAACCTCGA GGTGGGGACCTGTAGCCGTTGAAAGATCTGCCGGGTGACCGGTCCATTGGTGGTCCAGGGAAACGGCGAGGCATGAGAGGTGGGCCAGGGTACC CCCTCCTAGGACTCCCGGGAGGTGCATAACGGGGTCGATGGCAGTTGTTACAACTATCGCGCCTGGCGAAGTTCAGGTTGTTGCATGCAGGATC AGTGCACATCCAATCTCCTTCTCTTGGGCGGACATTGGGATTATTTTTAGGTATAATATCACCTCTGTAACCAGCGCCCATAGGGCCACCATCA AACCTGCCGCCAAACCTGCCGCCACCAAATCTGCCACCAATGAACCTGCCGCCACCGAATCTACCGCCATAAAACCTGCCACCACCGAACCTAC CGCCACCAAACCTGCCACCACCAAACCTGCCACGACCATGATGAGGTGGTGAATAATCTCGATACCTGGCAGTGTCTCTCCCTCTACCAAATCC ACGATCGCGAGGTGGGCTAACTGAATTCTCGTAGTCAGGACTGTACTCACGACTTCCATTTCGACGACGATCAGGTGATGCAGAACCTGCACGC ATTCTATACCCTTGATTGTTGTTGTTGTTGTTGTCGTTGGAATAAGGGCGAACTTCACCGGGTTCGTAATCGCTACCGGCGGGGG |
Primers for UN69150 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TCTACCGCCATAAAACCTGC | 60.096 | 20 | TGAAGTTCGCCCTTATTCCA | 60.576 | 20 | 280 | 906 | 1185 |
2 | ACGACTTCCATTTCGACGAC | 60.119 | 20 | TGAAGTTCGCCCTTATTCCA | 60.576 | 20 | 103 | 1083 | 1185 |
3 | CTGGCAGTGTCTCTCCCTCT | 59.579 | 20 | TGAAGTTCGCCCTTATTCCA | 60.576 | 20 | 180 | 1006 | 1185 |