Simple sequence repeat (SSR)
>UN68909 CATGATCTGCGTCCATTGAAGAATCAAAGGAATCTCTATTCTGATGTTCATTATTCTTCACTCCATATCCTCCATCCTGAGATATATGATAGTT TTGAAGGCTGCGACGAACTGGGCTTGACAAAGCATTTGAGAAAATGTAGTTCCTTGGTTGCTGATCACTCTGCTCAGATCGAAACCCTTGCACA CCAGTAGGAAAACCAGATGGCCCAGAATTTGTAAACGGGCTTACGGCTTGGGTATGCTGCTGCTGTGGAGCTCTTGGCCCTGTTGATGGCTCTT CCACGTAAGATTCCAGCTCAGCCTGAATATAGGCGAGTATATCATCAGAGGTCACTCTCAATCCTTCCGCTTGTTGCTTGGAAATCCACTGATA GAGCTTTTCCAGAGCAGTGCGTTCACCGGAAAGGAAGGAAAGCTTCTGATGACTCAAGGCCTGAGAGTATAATTGAGACAACGAATTCGCAGCG CTCGAAAACGTCGAATACATCGTCCGATCCACTTCGTCTAAGCTACTCGCTATCGATTTCCTCTTCTTCGACATTTTTTATTTTTATTCTCTTC TATAAACCCTAACACAACCCTTTTTAATCAATCGAATAAATTATTAAGCCTTTTCGTAATAATAAGGTGAATCTGTATAAATTAAGGAAAGGAA AGGAATCGGTGGTGTGGGTTGTTGGTTTTGGTTTAACCTATATCTCTACGTATCCTCCTCTATCCTTCCTTCCTTCCTTCCTGTGGTGGGTGTC TCACGCGTTACATAAATAAAAATTAAAAAGAGAGAA |
Primers for UN68909 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CCGATCCACTTCGTCTAAGC | 59.836 | 20 | ATGTAACGCGTGAGACACCC | 60.986 | 20 | 272 | 494 | 765 |
2 | AAAGGAAAGGAATCGGTGGT | 59.805 | 20 | ATGTAACGCGTGAGACACCC | 60.986 | 20 | 114 | 652 | 765 |
3 | AAGGAAAGGAAAGGAATCGG | 59.527 | 20 | ATGTAACGCGTGAGACACCC | 60.986 | 20 | 118 | 648 | 765 |