Simple sequence repeat (SSR)
| >UN68509 CTGAACATATAAAAGGACATACGGAGTACTTCACAAGCTTTCTTCCTTCATTGTCATTACTGCCTATGTAATATTAATTGGGAAAAAAGCAAGA ACAACTCGTCCAAGCTTTATAAATAGTACATTTTTAATACGAAAAACAAAGCATCAAATACCTTGTGTACTACACAATGTGTCACTTACATTTC ACATCCTGTAACTGTTGTATCCTCCTAAACCTCCTAAACCCGAGGCTCCATAACCACCAAATGATTGTCCACCATAATTCGATGATGAAGATTG GTACGATGAATTCCCCAATTGGGAATAGGAAGACCTCAAGCTTGACTCAAGACTGCTATAGCTACTTGGAATCGACTCTTTGCGCCCGTTGACA CATTCCTGAATAAGTTGTTGAGCTGTATTAACTTGTGACGATGACCCTTTTATTTCAACTGTAATTTCATCTGGTAAACCTCTACTCTCTTGCA CAGTCAGAATTGCACCACTAGTCCGACGGATAAATGCAATGTTTGTCCCTCCAACTCCAATGATATCCTCAGCATACTCTAGAGGAATTTGCAT TGTTTGAGCTATCTGAGTGACAAAAGGTCCACCAGTACGAGCTATTCCAGGAGAGCGTGTTGTGGGTAGCCCTGTAGATAGTGCAGGATCACGG CCATACAAGGAAAGCCCATGGGATGTGAGAAGTGATTCTCGCTGGGGTTGTTCACGGTCAAGAAAGAGTGTCTCTCTTCTCATTGGAAGAGCAT AATCAGCACCTCCTAACCCAAGCTGTGAGCCAACAGTGCGTGTCATGGGTTTGTCAGCCCATGATGTTTCCACTTGCTGTTCTTGTGGGGCTGC TGCTGCCGCTGTTACATTAGGTTTTTCAAACAAAGGTAGAACACTGCGGTCTACCAAAAACTTCCTCAGGTGTCCTATCACGGCTTCCAAAGCT TTCAGAACCTTGATAGCTTCTCCCTGTATATCCACAACCCTTTCCTCTGAGTTGGCAGATACTGCTGACACATCATCTGATAGCACCCGCACAG GACAACCAGTGCTCTCCTGTATTGACTTAATTACTGTTCCTTGTTTTCCAATCAGACTTATAGCTTGCATTGATGGGACCAATAATCGAATTGA ACAGAATGGAACAGATGCTATACTCTCACCCTCATTTTCCGGAAATCCGTTAACACGTTTGAATATTCTTATTGCAGCATCCATTGCAGGAGAG AGAGGTAGCTCTGCTTCTTCTTTGCCAGATACCAAAACAACGCGATCAGGAACACCGGCAGGCGCGTCAAGCACACGTATCCTCGCCTTCGTTT CTTCACACATCTTCCGAATAATATCACCTTTCCGTCCAATTATACTTCCAACTTTAAGCACAGGCACTATCAGCCTAAACACACACTCTCCTGG CCATCCAGGCCACTTCTTCTCCGTCGCCGGAGATGATTCCGTCGCCGGCGATATAATTTGATCCGGTTCCTCTGTTTCTACGATGGCGGTGGGG GGTTCTGTGACGGTGCCGTTGATGGAAGCCATTGATTAGTGTGTGTGTGTTTTTAGTGCGTGAGGGTTAGGGTTTTGTTTTGTTTTGTTTATGG AGAGGGGAAGGGGGGG |
Primers for UN68509 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | AGCACAGGCACTATCAGCCT | 60.043 | 20 | CCCTTCCCCTCTCCATAAAC | 59.761 | 20 | 238 | 1373 | 1610 |
| 2 | TGATCCGGTTCCTCTGTTTC | 60.05 | 20 | CCCTTCCCCTCTCCATAAAC | 59.761 | 20 | 142 | 1469 | 1610 |
| 3 | CATCCAGGCCACTTCTTCTC | 59.803 | 20 | CCCTTCCCCTCTCCATAAAC | 59.761 | 20 | 199 | 1412 | 1610 |