Simple sequence repeat (SSR)
| >UN68086 TTACAAACAACAAAGGTCTTTTAAGCATAACATCTTTTACAAAGAGAAGAGGAGAGACAATATACATGTTAAATACACGCACAATTATACGTAC ATTACCTGGCCTGCTCATAAGCTATCGTATGCCAATTATTATTATTATTATTCTATACAAACATGAAACACTGAATCAATACGGTGTTTCAAGG CAAAAACCGTTCTAATAGGCTCCCCAGTGAAAAGATGGTTTTATTTCTGGCCTGTGGTGCCTTTGAACTCAAAGGGGCTTTCTTGACATTAAGC ATCATTGTTTGTCCTATTTCTTTTCTAAGCCTTTCAATAGTTTTCATGTCTACTGGATTCCCGGAAGCATCTCTTACATAGAAAACGTTCACTG CTTGTTCCCCCACTGTTGTCACACCAGCTCTCGACACTGAAAGCCCATTTTCCCGGAGGACTCTTGTAACTTCGGAAAGCAATCCTACACGGTC TTTTGCACATAGTTCCAGGCTAAGGCCCTCGCTTACTCTTCGCAAGATTGCAGCTTCAAGACACCTGATGACCCTTTCCTCCTCTCCTTCAGTG TTGACGGGGGAGCCATCCACATAACGAACATAATACTCCTGTGTTGCATAGGGGCTATCAGATGTAATCATTGCATGAAAAACAACATATTTCA TGTCTGTGAGGGTGCAGACAATATCAAACATAAGTTTTGGCCGATCCCTACACCTTACGGTGACAACCGAGTAACCCTTCTCCAAACACCGATC AACTGAAATTTTCAGCTCTAAAAAAGAAGCACAATCAGCCTCAGCTGTTAACCCCTTGCCTTCATAATCCATTTCAGCAAACAACATCTGATGC AATCGACGGTCAACATGAGTCAAACCCAACGAGAATTTTGTATGAGCCACTTTATCATCATCACCACAAACACGAAGGATATTCTTGAGTTTCT CTTCCATAGCGGATAATCGAGCCGGATCATCCATAGCACGAGAAGTGGTATTGTTAGTCAAATAAACAACACATGCTGTTTTCCTATTGTGCGT CCAGACTTCAGCAGCTGACACATTAAACTGGAGGTTGGCGATAACAGCAGATATCTCTGATAACAGACCCGGGCGGTCCCTTCCGACAAGCTCA ATGGCTGTGTAATCACCCATTGAGTGGACCCCAACCCTTTTTGCGGGCCATGTTTTTCTTTCATCTGATGTGTGCCCTTTAGGACCGAGAGCCT TCTCTATGTATTCAATTGTCAAATTGTCAGTTATTTTGTTTCCTTGTTGGTCCGTGACATGAAACACATCCATGAACCATCCACCATCGGAGGA TATGTATGCTTTAGTAATGATGAGATCAAGGTCTGCCAGGATTTGGACCACTTCTAGCAGTATTCCTGGTTTGTTAACACTGTCAACCTTGACC AAAGTACAATCTCTACAGCTTTCATTATCCACAGAAACTCTTGGAGGATTTATTCTGATGCTTAAGCTTTCGTACTCAGGGTCAAAGTAAGGCA ATCCTCCCGAGGCCATTAATGAGGGTATGTATTATAAAGATGTCACCCTCTGTAGAATTTACTTTGTAATTACATAACTTTCAGTTTCTGCCGA ATACTAAAGTATTTCCTGAATGCCAGATCACATGCTAGTTTCTATGTGAAAATTTGTACACCCCTGGAATAAAGACCTAACGGAAATCTGAGCC TTTCGGATATGTTGTTTCACTAAAGGCCGCCTTTATTGTAAAAGGTAATTTAAAGAGAACCACAAAATGTCGTGCTTTCGACGTAGGAAGAGCA CTTATATGAATAACAGTGC |
Primers for UN68086 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | ACGTACATTACCTGGCCTGC | 60.022 | 20 | ATCTTTTCACTGGGGAGCCT | 60.074 | 20 | 136 | 89 | 224 |
| 2 | GGCCTGCTCATAAGCTATCG | 59.967 | 20 | ATCTTTTCACTGGGGAGCCT | 60.074 | 20 | 123 | 102 | 224 |
| 3 | ACGTACATTACCTGGCCTGC | 60.022 | 20 | GAACGGTTTTTGCCTTGAAA | 60.089 | 20 | 112 | 89 | 200 |