Simple sequence repeat (SSR)
>UN67777 CAGTCGTCGTCTGGCAACGAGGCCGTGAGATCCGAGTATCCTTCTTTTGCAGCACCAACTTTATCGACTGTGACTAGCTTCGATTTTTCATCGA TTTTGAACACTATGTAACGATAAACTTTTTTCCATTTCATTTCCATGAACGAGTTCTTGCATTCGTCCGCTACCCACATCCCCGTTGTCGCCAT CTTGAAAGCCATAGCCATGGTGCTGGTAGGTGATTGTACGAGTTTTCGGGCCACCGGTGGTGGTGGTGGTTCGAGAGAGAAGCGTGTGGTTTAC GGTGGTGTTAGCGTGTGAAAAATAAAGTGAGAGTTGA |
Primers for UN67777 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TTGCAGCACCAACTTTATCG | 59.872 | 20 | ACCGTAAACCACACGCTTCT | 59.662 | 20 | 239 | 47 | 285 |
2 | TTGCAGCACCAACTTTATCG | 59.872 | 20 | TTTCACACGCTAACACCACC | 59.615 | 20 | 256 | 47 | 302 |
3 | TTGCAGCACCAACTTTATCG | 59.872 | 20 | CGCTAACACCACCGTAAACC | 60.42 | 20 | 249 | 47 | 295 |