Simple sequence repeat (SSR)
>UN67722 ATACATATCAAAATCCAATAGTAATATTATCCAATAGTACACATCAAAGAAGAAAAACATTAACCTAGAAATCAAGATTACGAAATTAAAGATC TAAGCATTCAATCTAAGACAAACCTAGATGTTTCAGCAGCTGATTTATCGACCTAACAATAACCCATTGTATCAGACCATAGAGAAACTACACT GAAGGGTAAAAACACATCCTTTCATATGTAACTTGTTGGTACGAAGTTAATATATGATGCTAGAGAGAGACAGATAGAAAGATAAAGAGACCTA TGTTCTTGGGTCATGTCTCAAGCCCATGAAATGGGCTCAAGCCACTATCTCTTGGACGGTCTTTCATCATCATTGCCACCATCATCGTCGTCGT CGTCGTCCGAGCCATCTTTGCCGGATCTCTTTCTCTTGGGTGGAGCCTCAACTTTCCCAGCATCACCTTCATCGTCCTCATCCTCCTCTTCAGA TTCAGCATCCTCATCAGCACCGTTCTCTTCTGGCTCGAAATCACTAGCATCTTCCTCGTCTTCAGGGTTAGCTATTGGTCGAAGCAAGTGCTCA GTTGGTGCATCCTCCTCATCATCTTCTTCCTCATCATCATCATCATCGTCATCACTATCATCACCGTCATCCTCACCGTCATCATCTTCATCAC CGTCGTCATCCTCATCTTCATCATCATCATCCGCCGTCACAACCGGAGCTCCACCTGGAAAAACCTCCTGAACATCATCATCGTCGTCATCATC CTCTTCTTCCTCCTCACCGTCATCTCCGTCGTCGCTGGCGCCATCGTCTTCACCGTCATCTTCTTCAACTTCAACTTCACTGTCAATCTCCTCA ATCACTTTCTCTTCAATCACAACAACATCATCTTCAATGGTTATTGGAGTCATTTTTTTTTTAATTTTGTTTAGAATTAGAATTTAATTTTGGG GATTTTTGTAAAGAGTGAAGAGAGAAGGGGGAATAGAGGCGGTTGTTTGTTCTTCAGAGTAGCTTTGTGTGAAGGTTCATCTGGACCGTTCAAT TTGTGTTTGACAAGGATCGGTGACGTGGAGGGTGATCTGACGGTTGTCGT |
Primers for UN67722 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GCATCTTCCTCGTCTTCAGG | 59.95 | 20 | TCAGGAGGTTTTTCCAGGTG | 60.081 | 20 | 213 | 517 | 729 |
2 | TTCAGCATCCTCATCAGCAC | 59.95 | 20 | TCAGGAGGTTTTTCCAGGTG | 60.081 | 20 | 259 | 471 | 729 |
3 | CAAGTGCTCAGTTGGTGCAT | 59.905 | 20 | CGACGATGATGATGTTCAGG | 60.072 | 20 | 190 | 555 | 744 |