Simple sequence repeat (SSR)
>UN03586 CCATCATCCGTCAACAATCCTACACAACGTCTAACTAATTGCTTAAAATTCCAACACGATATAGTTTTACTACATCATATACTATCAACCAACA AATTCAATGGCGATACAGAACAGATCTACAGATAAAAGAATGACATTACATATAACTAGTAATATGGTACCTCAAATTCAAACACTGCCACCAG CCCACCACCATCATCGTCGTCATATTCGGATTTGAATTTTGATTTTAAAATTTCGACGCATATAGTAACATCAAGCGGTACTACTAGGTATTGA TAGTAAGTAAATGAATATTGCTGTCATCGTTCCCAGTAGCATACCCATGATAACCTGAGGAGGGGTGTGGCCAAGAAGTTCACGTAACGGCCTG CTCTCAGCCAAGGGATGTTCAGCAGGAAGCTCAAATACAATTTGGTTCAAAACCTCTGCTTGGCGCCCAGCATGTAATCTTACTCCCGTCGCAT CATACATCACGATGCAAGCCAAAATCAGTGCAGTTGCAAAAGTAGAACCGCCAAGGCCATCATGTAAACCAACAGCAACCGCAAGAGCAGTGAC TGTTGCAGAATGTGATGAAGGCATGCCACCAGACCCAATAAGTTGCTTAAGATCCCAACGGTGTTCCTTATACCAGGTAGTAAAGACTTTAATG GATTGAGCTAGAGCAAAAGCAGCAAGTGCAGAAATCAAAGCGTAGTTCATGTATAACGGAGGCCTTGATGGTGAAGATGATGACGTGGCGGTTG TTAAGTTTAACGGAGGTGATGATGACGTGTCCGTTTGTTGATGATTCATCACTATTTCACCTATTGATCTCATTTTTTTTATATATAGAAATGA ATTTGTATCACTGTGTGTGTGTGTTTTTAGTGCGTGTAAAATTGGGAATGAA |
Primers for UN03586 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GATGACGTGTCCGTTTGTTG | 60.008 | 20 | CATTCCCAATTTTACACGCA | 59.42 | 20 | 124 | 773 | 896 |
2 | TGATGACGTGTCCGTTTGTT | 60.008 | 20 | CATTCCCAATTTTACACGCA | 59.42 | 20 | 125 | 772 | 896 |
3 | ACGTGTCCGTTTGTTGATGA | 60.008 | 20 | CATTCCCAATTTTACACGCA | 59.42 | 20 | 120 | 777 | 896 |