Simple sequence repeat (SSR)
>UN66570 TTTGACTTTATTATAGTTTTTGGATCTGAAAACCTGAGAGCCGTACCAATCTCATCATCATATGACATGCTTGTAATCATTTAATTGCATACTT TGGTTGACTGGCCAGTTGTAGCAAATGGGTTCATCCCCGGGGCAGCGTTGTTACAATTGTTCATCTTCATTTCTTTCCTTTGGACCCCCAAAGA ATTGTTTATTTCATCACGACCTCTCTTTTTCTTATCTTCTTTTAAGAACACCCCAAAGAGTTTGAAACATTCTTCTTTTTCGTCATCATCATTC GAGTTCACATCACCCGTCACCGTCTCACCAACTACAACATCTCCTTTCATGATGCGATTGATCTGTTCAGGAGCCACCTTTACATTTTGAGTAA GGAATGCCACGAGATCGTCACACTGTTTTTTCATATGTGCAAGTTCTGACGTTAGCGTCTGTTTTTCTTTCTTTAGTTTTTCGTTTTCGTCTGA TAAATTCTCTAACTTTTCCATGGTTGGAGTGTCTACTGAGCTTGGATTCTTTGAACCCGGCGAAGATGTTGAGCTAGATCCAAGATCATCTCCT GAATTACTTGGTGATGTTGTTGGACCAATGTCACCAGCGGGCTTCCCATTTGCATTAGCTTGGGATGATGTCACGGTTTTCCTACGGCGGATTT CAATGAGAAGATCTTTCTGCCCGCGCCTAAAGTTCTCATTTGCAAATTCCCATTTGTCTGGCACAGTTTTTCGAAATCCATAAGTATTAAGCTG ACGAACAAAGCTCGAAAAATTATTATGCTTAAACGAATTCGGAAGCAAATCCCTAGCAAAATCAGCTGTTTTCCATACCACAAAAGTCGTACCA TCACCATTCCATGAAATGATATCATCCGTCGCAGGATCATCCACCAATAAATATGTCTTCGTCAAAAACGGTGCAGGAACTGACCTATGCGTCA TGCTTTCAATCCCACCTAATCTACCTAACTCCCAAAACCCGATATTATTTCACTAAGTTGTAAGGTATCAATACAGAATAATATACCGAGAAAA AAAATATATATATATCAACAACTAAATAGCAAAAGCGCGGTAAGAAACTCCCAGTCCCAACAATAAAAACCCGAAAGAAACAATCTAGATCGAG TCAGATCGTAGCTAGAAAGATTAATCGTGTCGCTAACTAACGAGGAAGATTTTTTAGTTTCTGTCATTAGAGTGTATTTGTTGAATAATTTGAA ATGAGACGAACATAACTTCTAACACAAGTATTAGTTGAATCAACAAACACGAAGAGATTGTGATGAT |
Primers for UN66570 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CGGTGCAGGAACTGACCTAT | 60.134 | 20 | TCTTACCGCGCTTTTGCTAT | 60.006 | 20 | 165 | 915 | 1079 |
2 | AAAACGGTGCAGGAACTGAC | 60.156 | 20 | TCTTACCGCGCTTTTGCTAT | 60.006 | 20 | 169 | 911 | 1079 |
3 | CCTATGCGTCATGCTTTCAA | 59.833 | 20 | TCTTACCGCGCTTTTGCTAT | 60.006 | 20 | 150 | 930 | 1079 |