Simple sequence repeat (SSR)
>UN66287 GGTAGTACTTCAGGGGCAAACATAAAGAAAGAATAGTTATTAAGTTAACTGTTGCAACTTTACAAAGAGATGTTTAATTGGCTATTCTTCATAT ACTTATGTACAAATATTGTCTGAAACTTTGTAATGTATCTTCATCATGTATTTTTAGTTTTGTCAATGCTCTCGTTTCTATTCGGCGGATCCAT TCTTTGCTTACACCATAGTAGCCCCCAATCTCCTCAAGTGTCTTGCGTTGGTAACCTTTGAGCCCAAATCTTAAAATTAACACTGTCCTCTCCT TCGCAGTCAGATCATTCAGTCTGTTGTACATTTCACTGATCATATACTCCTTCATTAGAGTTTCTTCAGGAGTCATCATTGTTAAATCAGGTGT ACCTTCCCAAAACTTGGCATCAATGCCATTCCCAACAGTGCGATTTATGGAACCAACAACTCTAAGGCATTTGGTAGCTGATTCAATCTTAGCC AACGAAAAACCTGTGAATTTGGATATCTCAGAGTCATCTGGGCATCTTCCATCACCTTTATCTAGCGCTTTTCGAGCCTTTTGTATCTTGCTTA TAGCCTTGCTCATTGTAAAAGGAATTCGTATCTCTCTGGCATGACGGGATAGTAGCATTAGCAATGATTTCTTTATCCAATACTGTACATATGT CGAAAATTTATATCCTCTACTGCGGTCAAACCTTTCAGCTCCTTGAAGAACACCAACGTTTCCTGCCTGTATTAAATCTTTGAAGGCTATTCCT TGACCATTGTAGTTCTTTGCAAGGTATATAACCAACGATCTTGTACTTCTCAGAAGCTCATCCCTGCAACACCAACCAAATTGCAAGTTTTCAA GCAACTCTTTCCTGTCAACTCCAGCAGCTGCCGCCCAACTACTAAAACTAACCATGGAACCCGTTTCTTCTTCCAGCATTGTCCTAATCCTTTC CAAATTAGCAACCATCTTAACTCCTCGTGATAGCTCTGCCTCATTCCTAGTAATTTTAACTCTTCCACGCTTAGTATTTGATGATCTTCTTGAG GAGAGGTTGACCCGTCTTGAATTCTTATAGTTAGTTGCTTGCGGTTGAAATTCTACTGTACAAACACCATTAACCTTTTTTGACATACGTTCTC TTTGTGACTTTCTTTCAACTTTTCTCGTAGAATGCACAATAGGCTTCTTGACGGTTTCTTCATTTATAGGACTAACTGATAATGGGTATTTGGA TATTTCGGAAAAAGATGTACGAAGAAACTTCAAAGCACCAATCTTTTCTAGTTGAACCAATATGTTACGCTCTAACGATACCACATCTGAGTCA GCAAACGTATCTTCCAAAACAACAAGATTTTCCAACAGTAACCTATATTGTGATATCTTGTTTGCTTGTAAGCTTGTAAGGAATGTTAATATAT CGTCTTGTAACAAATAACCGACACTTCTCTGTACGTTGCTGGTTTCCGAGTAATCTGTGTCCAAGATCCGCGAAATAGAAGAACAAGGATTTAC GCCACTAGGATCATTGTAGGAATTCTCACTTTCCATTGGGATAGATACTCTTGCCAAGTTATAATTGATGTCCTTGACTTTAAATGATGCACAT GTTGTTGTTGAAGATGGCAAAGAAGAAGTGTTGGAAGATATACGAGGTTGAAGTGTAAGACCCCATTTCAAACCCAAACCCATGGTGATGATTT TGCATTAAAAGATGAACAACTGTAAGATGATGATGATGATGATATACAGAATTGGTTTTGTTTGTGACATGAGATGTTGGCCACTGGTTTC |
Primers for UN66287 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CCAAACCCATGGTGATGATT | 60.439 | 20 | GAAACCAGTGGCCAACATCT | 59.973 | 20 | 112 | 1672 | 1783 |
2 | CATTTCAAACCCAAACCCAT | 59.523 | 20 | AAACCAGTGGCCAACATCTC | 59.973 | 20 | 121 | 1662 | 1782 |
3 | CATTTCAAACCCAAACCCAT | 59.523 | 20 | GAAACCAGTGGCCAACATCT | 59.973 | 20 | 122 | 1662 | 1783 |