Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN66286
GGTAGTACTTCAGGGGCAAACATAAAGAAAGAATAGTTATTAAGTTAACTGTTGCAACTTTACAAAGAGATGTTTAATTGGCTATTCTTCATAT
ACTTATGTACAAATATTGTCTGAAACTTTGTAATGTATCTTCATCATGTATTTTTAGTTTTGTCAATGCTCTCGTTTCTATTCGGCGGATCCAT
TCTTTGCTTACACCATAGTAGCCCCCAATCTCCTCAAGTGTCTTGCGTTGGTAACCTTTGAGCCCAAATCTTAAAATTAACACTGTCCTCTCCT
TCGCAGTCAGATCATTCAGTCTGTTGTACATTTCACTGATCATATACTCCTTCATTAGAGTTTCTTCAGGAGTCATCATTGTTAAATCAGGTGT
ACCTTCCCAAAACTTGGCATCAATGCCATTCCCAACAGTGCGATTTATGGAACCAACAACTCTAAGGCATTTGGTAGCTGATTCAATCTTAGCC
AACGAAAAACCTGTGAATTTGGATATCTCAGAGTCATCTGGGCATCTTCCATCACCTTTATCTAGCGCTTTTCGAGCCTTTTGTATCTTGCTTA
TAGCCTTGCTCATTGTAAAAGGAATTCGTATCTCTCTGGCATGACGGGATAGTAGCATTAGCAATGATTTCTTTATCCAATACTGTACATATGT
CGAAAATTTATATCCTCTACTGCGGTCAAACCTTTCAGCTCCTTGAAGAACACCAACGTTTCCTGCCTGTATTAAATCTTTGAAGGCTATTCCT
TGACCATTGTAGTTCTTTGCAAGGTATATAACCAACGATCTTGTACTTCTCAGAAGCTCATCCCTGCAACACCAACCAAATTGCAAGTTTTCAA
GCAACTCTTTCCTGTCAACTCCAGCAGCTGCCGCCCAACTACTAAAACTAACCATGGAACCCGTTTCTTCTTCCAGCATTGTCCTAATCCTTTC
CAAATTAGCAACCATCTTAACTCCTCGTGATAGCTCTGCCTCATTCCTAGTAATTTTAACTCTTCCACGCTTAGTATTTGATGATCTTCTTGAG
GAGAGGTTGACCCGTCTTGAATTCTTATAGTTAGTTGCTTGCGGTTGAAATTCTACTGTACAAACACCATTAACCTTTTTTGACATACGTTCTC
TTTGTGACTTTCTTTCAACTTTTCTCGTAGAATGCACAATAGGCTTCTTGACGGTTTCTTCATTTATAGGACTAACTGATAATGGGTATTTGGA
TATTTCGGAAAAAGATGTACGAAGAAACTTCAAAGCACCAATCTTTTCTAGTTGAACCAATATGTTACGCTCTAACGATACCACATCTGAGTCA
GCAAACGTATCTTCCAAAACAACAAGATTTTCCAACAGTAACCTATATTGTGATATCTTGTTTGCTTGTAAGCTTGTAAGGAATGTTAATATAT
CGTCTTGTAACAAATAACCGACACTTCTCTGTACGTTGCTGGTTTCCGAGTAATCTGTGTCCAAGATCCGCGAAATAGAAGAACAAGGATTTAC
GCCACTAGGATCATTGTAGGAATTCTCACTTTCCATTGGGATAGATACTCTTGCCAAGTTATAATTGATGTCCTTGACTTTAAATGATGCACAT
GTTGTTGTTGAAGATGGCAAAGAAGAAGTGTTGGAAGATATACGAGGTTGAAGTGTAAGACCCCATTTCAAGTTGAGCCTGAAACCCAAACCCA
TGGTGATGATTTTGCATTAAAAGATGAACAACTGTAAGATGATGATGATGATGATATACAGAATTGGTTTTGTTTGTGACATGAGATGTTGGCC
ACTGGTTTC

Primers for UN66286 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1TCAAGTTGAGCCTGAAACCC 60.23220AAACCAGTGGCCAACATCTC 59.97320129 16661794
2TCAAGTTGAGCCTGAAACCC 60.23220GAAACCAGTGGCCAACATCT 59.97320130 16661795
3AGTTGAGCCTGAAACCCAAA 59.71120AAACCAGTGGCCAACATCTC 59.97320126 16691794