Simple sequence repeat (SSR)
>UN66275 GTGACGTGTGTGTGCATTGTGTATTCTTAACAATATATAAACTAGATGCTTATTACGAAGCTTCCAGACAAAACCGGCTCTCACCACAAGACCC TGGTCTCACGAAAAATGTAGGATTTATACAACCCACAAAAACAAAAGATCGATCAAACCGTTGCTCACCCTTTAACCAACAAGAACTTGGCTCG AGTTCATCTAACCAGAAAACGAAGTTTATATGTAGCACTATATTAGACAGCATCACTTCTATGTCTCTCATTGTTGTCTTGAAAGCTCAATGCA GGCTCATTAGACTCTGAATTTTTCATAATCCTAAGCCTCTTGACGGAGCTAAGAAACATCTGCCATGGTACATCTCCGACAAGCATACAGTCTC CATCTTTGTCTTCATAAGTTAGAACAAACTCTGATGTTCCATCCAACAATCTTGAAGGTCTTGCAGGGTCTGTGCTCGACCGTCTACCCCAAAA CATTTCTTCTAAAGTTTGAGCCAACATCTCATAGGATGTGTAAGAATTGAGATCAACTTTCCTTCCTATAGGAGCTCCATCCATGTTCACCTTT ACAGATCGATATTTGTTGTTGGAAATTACTTTTCGCTCGTCAGAATAATCTTTGATTCCAATAGTTCTGTTCGTGCTTTTGTTTTGGTCGGTTA CTGAGACATGGTTTTCGGTTGGTGACTTAGCCAAACTTGGCATCCTGTGAGCTTTACTTACAGGTGGCCATCCAACAACACTAGGAGGTGAAAC AGAATCAGTAGCAGATCTTTTAGTACCACCAGAATTAGAAGATGAAGAACAACAATTATTATTATTATTATTAGTACTAGTACTAAAATCTTTA GCAGTCAATATTCTTGCATATTGACCAACCCAACCACCACC |
Primers for UN66275 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GTGCTTTTGTTTTGGTCGGT | 60.015 | 20 | GGTTGGGTTGGTCAATATGC | 60.059 | 20 | 245 | 637 | 881 |
2 | TTTCGGTTGGTGACTTAGCC | 60.11 | 20 | GGTTGGGTTGGTCAATATGC | 60.059 | 20 | 211 | 671 | 881 |
3 | ACTTGGCATCCTGTGAGCTT | 59.874 | 20 | GGTTGGGTTGGTCAATATGC | 60.059 | 20 | 189 | 693 | 881 |