Simple sequence repeat (SSR)
>UN66241 GTCTACCATCATCATCATTATCATAATCATCACTAGCACTACCTCAAACGCCACGTTTCCACAGCATCATTTTCCGGCCACCACACACAGCAGC AATCCTTGTCTTAACATTCTCAAACTCAGAAACCCTACAAGGAATAGTAATACCACCAGGATGATCATGGCCATACTCATCTTCAGCTTTCCTT AACAACTGTCCAAATAAAGGATGATTTATATAAATCACAGGCACTAAAACCCTCTCATAATCACCATCCTCTTGTCCTACATATACTGCCATCT TTCCTTTAGGTACTTCAACAAGTGGATCATCACGGACTCGCAAATAACCCGAACGAAAACGGAAACGAAAACTAGGGTTTTTAGAACATATAGC TCTTGCTTTTGACTTGAGTTTACTACCCCACTTTATAAAACGTGAAAAAGTTCTTCGAGACGGGTTAACTCGTCGGTAAGTCGATGCTGATGAG TGGCTTTTGCGACGAAAAGTACATCGAAAAAGTGAAAAAACTTTGCGTTTGACCAAAAACCCTCGGATTTTTTTCATTTTTTTCCAAGAAACTT AAAAGTAAAAACCCACGTTAGGAAATGAATATTAAAGATGGGATTTTAAGGAAAATATTTGGTTTCATGAAAAGGGCCAGGGGTCTGCAACTGA CATGGTTAAACGAAACAAAGTGAGGCAAATTTCTGAGAGTGAGATAGGTATATTTGACATGATGCTAGCTAGAGAATTATCATTTAATGTTTTC TTTGTTTTCAATTCTTGTGATTTTTTTTTTTGTGGTTTGGATTGTGAAAACAAGACCACCGAGTTTGATGATGTTTGTGTTTTGTGTGTGTGTG TGTGGATTGGTTTGGTTTGGTTGGTTTTAAGGTGGAGAA |
Primers for UN66241 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GGGTCTGCAACTGACATGGT | 60.999 | 20 | AAAACCAACCAAACCAAACC | 58.694 | 20 | 230 | 645 | 874 |
2 | GGGTCTGCAACTGACATGG | 60.105 | 19 | AAAACCAACCAAACCAAACC | 58.694 | 20 | 230 | 645 | 874 |
3 | CAGGGGTCTGCAACTGACAT | 61.134 | 20 | AAAACCAACCAAACCAAACC | 58.694 | 20 | 233 | 642 | 874 |