Simple sequence repeat (SSR)
>UN65527 GCCACACCATACCCCGAAGAAGCTCCTCGATCCTGATCACCAGTGAGGAGCTTCTCAGCAAGCTCCCATTGGATCCTGTCAGCGTAAACCTCGT CCTCCAAGACATCCTTGGCAAGCTGACCCCATTTGTCGAAATCACCCTTTGTGTTCATTAAAGGGTTAGTTGACATCCATTTGAGATAGTCAGA AGGCAGCATGCCTAACATTTTTCCTTTGTGTTTTCCAAAGTCTATGACAATGTCACGTGGGTGAATCTTTTTAATCTCCACCTTGTCCTTGTTA CTTTTTATCTTATTGTTCTTGATGTTGTTGTTGTTGTTGAAGCAGCATGAAGCTACTTCTCTCAACCTTAAAGAAGAAGAAGTATAATAAAGAT GGTGATGTGGTAAAGAAGAAGAAGAA |
Primers for UN65527 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CAATGTCACGTGGGTGAATC | 59.812 | 20 | GGTTGAGAGAAGTAGCTTCATGC | 59.561 | 23 | 114 | 236 | 349 |
2 | CCATTTGTCGAAATCACCCT | 59.79 | 20 | GGTTGAGAGAAGTAGCTTCATGC | 59.561 | 23 | 227 | 123 | 349 |
3 | GAAGGCAGCATGCCTAACAT | 60.243 | 20 | GGTTGAGAGAAGTAGCTTCATGC | 59.561 | 23 | 163 | 187 | 349 |