Simple sequence repeat (SSR)
>UN65152 TCTCACTACACATTCGGACTCCAAAGACTCCATAAACGCCAGTTAAACAACCCTATCACATCCGGTAACACCTTTCTAGCCAACCCTTTGTTAT GCTGACTCATCGCCGGAGCTCTTTCAACCACCTCAGTAAAAACCCTAGTTTCATCTTTTTCCGGTAAGGGTAAATCTTCCACACCATTTACCAC CGGTGCCAAAGTTAAACCTTTTTCGTCAAAATGACATTGACCCATTTGACCATTTGGTAAATCTTGAATACCCTTTTGCTCCGGTGACGGAATA AGTGTTTTTCCGGCACCCATTTGACCATTTTCTGTTAGGGTTTTGACCTCCGGCGCCGAAGTACAGCTTTTTCCGGTTAAATGACGGTGACCCA TTTGACCCTTTGGTGAATCTTGAATACCCTTTTGCTCTGGTGCCGGGAAAACAGTTTTTCCGGCGAGACTCCGGTGACCCTTTTTCTTGGTTTT CTTTTTGGTGTTTTCATTTGAAGTGGTTAGGGTTTCTTCAAAAGCTTCAATGGCTTGGTGGATAAGTTCACGGTTAGGTGAAGAATCCCATTTG AACCAATAGCTAGTGTAGCAATCAAAACAATCACACTCAAACAATGGTGTTGTGTGTGTTTTCAAGGTTTTCTTTTTGGTGTTTAAGGTTATCA TGTAGGCTAACACATGTTTGTCTTCTAAGGATAAGACAATGGTTAAGGTAAGGATAGTTGCCGGTAAAAGGTTTAGGATGGATAGTATGTTGTC ACCGGTTGGTGGTGGTGGTGGTGGTGGTGTTAGGGTTTGTTGGATAACCAATGTTTCGATTACTTGTTGTTCAAGGCAAGTTTGTAAGCCTTGA CAAACTATTGTTGTTGCCATGATAGATAAATTAATCAAGATTTTGTATGTAATAAAATCTTGAAAAAAAATTTGATTGAAATTAGATAAGGTTT TGTATGGAATGT |
Primers for UN65152 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TGCCGGTAAAAGGTTTAGGA | 59.581 | 20 | GGCTTACAAACTTGCCTTGAA | 59.393 | 21 | 126 | 717 | 842 |
2 | CGGTTAGGTGAAGAATCCCA | 59.926 | 20 | CGAAACATTGGTTATCCAACAA | 59.736 | 22 | 270 | 541 | 810 |
3 | TGCCGGTAAAAGGTTTAGGA | 59.581 | 20 | AGGCTTACAAACTTGCCTTGA | 59.031 | 21 | 127 | 717 | 843 |