Simple sequence repeat (SSR)
>UN64909 CAAAAAACAATCAACTAAAAAACCATACAATACTAGAAACAGATAAAAATAAAACAATATCTGGTCTTGCAAGCACATGTATACTAATGATGTC CGGGAAGTTTATCTTTAATCTTGTCCATGAAACCTTTCTTCTCGTGTTCTTGCTCCACTTTCATACCCGTTGTTGTTGTTGTTGTCGTTGTTGT TGTTCTCGGCCTTTTGCATGTTTTGTTCTTGATACACTTTTCGTAACCTCTCGATCTCTTTCTTTAATGCTTCTTGATGCGCATCTTTGAAAAT CTTGTCTTGAGCCAAAGCTGCTATTCGTTGCTTGAGTGCGCTGTTATCGACATTTAGAACCAATCTTTGGTGGTCCAAAAACGCTACCCGTGGT GACAATGCGGACACTTCGGTCTGTAATGTGGTAACACTGCGTTCGAGTTCAGAAATGTATTGCAACTTTCTCACTCGTGATCTCTGAGCAGATT GACGATTTGCCAAAATCCTTTTCACTCTCTTTGGATCAACAATGGTGCTACCATCGCTCGAGAAATTAAAGCATGGTTTAGCCGAATCCATCTC AGTTTGACAACCACTCCCATCTTCTACCTCACCAGGCTCGTTCTTTGGCTGTTGTTGTTGTTGTTGTTGCTCCTGCTGCTGCTCTTGTTGGTGC TTGTGTTGGTCTAGTGGCAATGTAACCTTCCCCTCATCATTATCACTATTTTGATCCGAAGGCGTAGAAGGATTCGACGAAGATCTGGTCGAGG TAGGCACATTCGTCCCAACGTCATCAGCAAACATGGAACTAAATTGCTCATCATCCAACCGTTCAA |
Primers for UN64909 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CTTCTCGTGTTCTTGCTCCA | 59.161 | 20 | GTCGATAACAGCGCACTCAA | 60.019 | 20 | 202 | 132 | 333 |
2 | CTTCTCGTGTTCTTGCTCCA | 59.161 | 20 | TCGATAACAGCGCACTCAAG | 60.157 | 20 | 201 | 132 | 332 |
3 | CTTCTCGTGTTCTTGCTCCA | 59.161 | 20 | GATAACAGCGCACTCAAGCA | 60.165 | 20 | 199 | 132 | 330 |