Simple sequence repeat (SSR)
>UN64865 CTTCAATTTTTGAAATTTACAAGACCTGTTTCATGACGACAACAACAATTACATCAACTAGAAAGCCCGAAATTTTCACTTTTCACGACATACA ACTTGAAGCAAATACGCAGAACCAAATGTACAATTCCAGATGTGTACAGTAATTACAAAGGTGGGACGGTCTTTGATCGGATAAATTGTTTGAG TAAGGCCTTTTCTTCATCAATTTTCTTCTTCTCTTGAGGATCTTTCGTCTTTACTTTCCTTTTCTCCTCCAATATCCACTTGAAGAGCTCTATC TGCTGATCCACGGGAATTGTTTTCACTGGCTCTGGGGTGGCAGGAGGCGATGTTGGCACATGGTTCACTGCAGCAGTTGAAATAGCAGTTGATG TAGGAGATGAAGTAACAGCAGTTGCAGGCGCATCTCTCGCATCTCCCTCTGTTTTCTCCTCCTTTGTTCTCGTGAAAAGGTAAGCTCCGATGGA GAGATTGACGGCGAGGAGAAGAGGCCAGATGAACTTGGACCGGCTACCCTTTGGCGGTGGTGGTGGTGGTGGGGCCGGAGGAGCAGATTCAGTA GCCAT |
Primers for UN64865 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TCTCGCATCTCCCTCTGTTT | 59.95 | 20 | GGCTACTGAATCTGCTCCTCC | 60.363 | 21 | 157 | 411 | 567 |
2 | TCTCTCGCATCTCCCTCTGT | 60.096 | 20 | GGCTACTGAATCTGCTCCTCC | 60.363 | 21 | 159 | 409 | 567 |
3 | TCTCGCATCTCCCTCTGTTT | 59.95 | 20 | TGGCTACTGAATCTGCTCCTC | 59.588 | 21 | 158 | 411 | 568 |