Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN03540
CCAAGAAACAGACTGCATTAAAAGTTGTTAACGATAGCAAAACACATATTTGTTGCTATTACAGCTACAAGAGAAACTAATCGGCTGTTCTGCT
AGACATTCTCAAGCTTATAACATATACAATGCTAGACAATCTTCCACACGTACAAATGACATGCATTACAAAACATTCGTGTTAAAATGACTAA
CCGGTTGAGATGACTCAAATCATGATGAATGTCATTCACATGCAGGTTTTGTATCAAAGCTACTGAGACAGATCGCAAAAGCTTGGTAAGCAGA
AAGAGGGTACCGATAATCCATGGTGAAAATGTCTTTCCCAATCTTCCCAAATTGCAGGATCACTTTATCTTGTTCTGCAGCCGACACATTGTGA
GAAGGATCAACAGAAGCTACAAGCTGGAAATTCTTCACAGACGCTACAGTCACACGGCCTTTAAAATTCAAACACCAGCATTGTAATTGCTCAT
GCCATCTAGGAGCTTTGTTTTTTAGCATCAAAGAGTCGACGCAAATGGGTCCTGAAACAGATGAGATTGGTCCTGATACAGATGAGATGGGTCT
TGATACAGATGAGATGGCTCCCGATACAGATGAGGTTGAACGATCAAAGTTCAGATCCTTGCTTTTAAAGGATGGTGCGGAGAGTGAATTTGTG
TCATCAAATGAGTGTGGGAAAGATTTTGGAGTTGGAGCAGAGCCCCCTTCTTGGATCGAGGAAATAGGTATAGAATGCATCACACAATTCATTC
TTCTTGGGCCACGTGTACGCAAAACATTGAGTTCATAGGAGATTGTGGCTATGCTATAGCTACAAGCGGGTACTCTAGGAGACACTTGTTTTTT
ATTAAATCTTTGACTTGCACGGTTATTATTAGGTTGAATTGATGTGTCGCTTGGAGGTTGGCTGTCATAAATAGTGAACTTGGTTCCTAGAAAA
TTGGACCTTAGTTTGCCAACATAGGTTGAACTAGCACGTGAGAAATCATCTGCAACCAATGAGATAGCAAACTCTGTACGTGTTGCCTTTCTGA
TTTTCTTTGCGGCCAAAAGCAGCTTATCACTTTCATCCTCAGAAGGGGTCAGCCCAAAGTACAATCGATGCGTAGAAGTTGCTCTATCTCTTCT
TATGTAACACTGAATTGGAGCATCTCGAGGACCAGGCTGCTTCAACGATATAGGAAAGGTCAACCTCCCACACTCCTCGGGAGTCTTAACAATC
TCCTTAGTAATATCTCTCCACGACTTACAAACCGAAGCACAATAAACCACAACCGTTCTGGCCGGCCACGAGGTCTCGCTCTCTTCAACTCTAC
GGATGATATCCAAAAGCAATTCAGGAGGCAAATTGGCCCATTGACCTTGGTCAAATAGTTGGGATGGAAGAGCTACATCAGGTGCAATATGTGA
TCTAGTTCTACTTCTCCAGTGTCTACCTTCAATCCCTCGTCTTGATATACTCCCTATCCCGTCTCTCATCTCCCTCAATTCGCGCACTATTCCT
TTGAATGACATCTTCTTCTTCTTCTTTATTATTATAATAATTTATCATGCCAATCTTAAAACTCCCTTCAAAAGAGAATCCGGATAGAGGTGAA
TGACACGTGTCAGAACGGAAGATGAACAGATCGGATAAATAGATGTAATCGATTCATAATTAATTGTATAATAAGATAGATCTAATTGTTTTTT
GTGGTGGTGATTACGGTTACGGTGGTGCCGTGGATTCCGGCGGGAAATCCGGCTGGGTTCGGTGGTGATGAGATGAAAAGAAATGAAAATGTTG
ACGGTGTTAATGATATGTATGTGTGTG

Primers for UN03540 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1ATCCCGTCTCTCATCTCCCT 60.03520CCGATCTGTTCATCTTCCGT 60.07320167 14661632
2ATCCCGTCTCTCATCTCCCT 60.03520CCGTAACCGTAATCACCACC 60.1120249 14661714
3ATCCCGTCTCTCATCTCCCT 60.03520CCACCGTAACCGTAATCACC 60.1120252 14661717