Simple sequence repeat (SSR)
| >UN64550 TTTCTAGCAACCAGTAATACCACTGTATTAAATAGCATGTAATACACCCTTTAACAGCAATTCAAATTGTAGCATACTCTGCAGATATTTTAAA AGATCATCTGATGCAAATAATAGTTTATATCCATGAACTTAAAGGTTACATATATAAGCATATTGTCTACCTCATTCATCAATACTGGCCTTTG TTCGATATCTGCGAGCACCTTTCTGCAAGCTGCTACCTTTATTGATTACAGGCTCATCTTCATCCATCATGCAAACCTCACTATCCTCAATACT AACGGAAACAAATTTCTTATGCATGTTTTCTTCATTTCCATCCACCTTGCCTTTTGTCATTAAACCTTCACCAGACTTCTTTTTTTGGAGTAAA GACGATCGACTTTAAGGAATCAGCAGAAACATCTTCTTGTATCTCCATGGCAGCAGACCCCTTCAATGTATTTAGGAAATCCATACAGGCTTTT CGATTAGACTCTTCATCAACTTCTTCATCTGAATCAAATGTATAGTGTGTGTATCTTGAAGGGTTAAGAACATGATCTGGAACATTACAGGCTC CTAATTTTTTAGCGGATTCATAGTCTTCTTTGATCCTTAGTTTTGCTGCCTTGTGATTTGCTCGAGGATCCTTGATTACATCAGTTAACGAGCC GGGAAGCGCAATGTTAGAATCCATTTCAACTTCATAATCATTGGCATCTTTCATGTAAAAGCGTTCTGCGGATTCTTCCTTGCCTACGGCAACC TTGTCAAAACAATCTTCCTCTTCCTCATTGTCAAGAGTGCAGTCCAAACCAACAGAAGCGCGAATATCCCACTCGTCACTAGTATGATCATCCG GTTTAACAAAACCCATCTCCCCCTTATCCCTCTTATCACCATCATCATCATCATCATCGTCATCTCCATACTCCATAAGACTAATTAAAGTATC AGGTACTGATTTCGTTTCTGCTTTGGAGGCGCTATTCACCTCAAGCACCTTTGAGACAGGAGAGGATAAATCAAATCTTGGAGGTGGTGGGGCC ATTTTCCTTGGAGGTGGTGGAGGCATTGCCCTTGGAGGAGGTGGCATCATTCCATTGGATGATGGCTGAACCAGTTTCACCGGAGCTGGCATGG ATGACTTTACCTCACTTGGCTTTAAGATAACTGATTCCTGTGGCAAGTCATAAGCAAATAATCCAAGGGGATTCTCCATGATCAGTTGACAAGA ACATAAATAAAAAATATACAAGACTGAACTTTTACAATTTTC |
Primers for UN64550 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | TCATGTAAAAGCGTTCTGCG | 60.014 | 20 | CCTCCAAAGCAGAAACGAAA | 60.357 | 20 | 261 | 709 | 969 |
| 2 | CAAGAGTGCAGTCCAAACCA | 59.873 | 20 | CACCACCTCCAAGGAAAATG | 60.345 | 20 | 270 | 784 | 1053 |
| 3 | CAAGAGTGCAGTCCAAACCA | 59.873 | 20 | CCTCCAAAGCAGAAACGAAA | 60.357 | 20 | 186 | 784 | 969 |