Simple sequence repeat (SSR)
>UN64535 AAAAAAAACTATTCAACCGTTGTCACCTGTTGCCATTCTCCATCAACGGCTTCTTTCCACAAAGTGACATTGTTGTCACCAGCAGCCACCGCCA AAATATTTCCGGTCAAAGACCATGATACCCTCCAAACCGGGACCTTGAAATCATACAACACCTTACCATTCCAGTTATCGCCTTCTTTACCAAT AGTCCATATCACAACTGTGCCATCCTCAGAGGCACTTGCAATTGTTGATTTTGGAAGTCCAAGGTTCGGGGCCCAAGCAACAGCACGGACCCAA TCTGTGTGCATTTGTAAGGCGGGAAAACAGTCCATTTTCCAGATACCATTAGATAGCTTCCACACCTTTACAGTATTATCACACCCACCAGAAG CCAACTTTTGTACGGGTTCAAAAGGACCAGATCCAACTAGAGCCCCAGGAGCCATTGATGGAGCCCATGAAACAGAGGTGACCCCAACTGGGTG AGCCTGGTCGATTCGCGTGGTATCCCACCCACCATCTGACCTGGCTGTATGAACCGAGATGTTCCCATCAGACGAGCCACAAGCCAAACATAGT CCAAGCTCATGTGGGGCCCATGCAATAGAGTTGACTGAAGATTTATGGTCAGTAAAAGTATGGAGTTGTGTCCACTCATTTGGGTTAGCTTCCT TCCAAATTATAACGGTTGCATCATACGAACAGGATGCAAGGAGTGATCCGAATTTGGGGTGGGCCCAAGCAACCTGCCATACCGGACCGTTGTG ACCAGTTAAAGTGGTGAGGTGTTGGGAAGTAGAATTGTTGTTGCTAACACCGATTATCTTGATGGAGGCATCAGAGGATGCAGATGCCACTCTC TTTCCATAATAATCCATGCATACATCATGGACAGTATCGGTGTGGCCTGTTTCAATCTTTTGTGCAGGCATGTTCTGTAATTGAGCTCTTCCGT TAAGTTATACGATAACTGAATTCCTGTGTGTAGATATATATATATCAGTGAGTTATAACGCCGGTAAGATATATTCCG |
Primers for UN64535 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | AGTGGTGAGGTGTTGGGAAG | 60.002 | 20 | CGGAATATATCTTACCGGCG | 59.433 | 20 | 257 | 762 | 1018 |
2 | GGTGTGGCCTGTTTCAATCT | 59.973 | 20 | CGGAATATATCTTACCGGCG | 59.433 | 20 | 134 | 885 | 1018 |
3 | GCAGATGCCACTCTCTTTCC | 59.957 | 20 | CGGAATATATCTTACCGGCG | 59.433 | 20 | 187 | 832 | 1018 |