Simple sequence repeat (SSR)
>UN64514 CTCACACTCTTATTGCAGTGACCAGTTGTTGACTGAAGCTGAAGTGGTATAATACGTATTCTACAAAACATTCCCTCTTTGTTTCACCTGGCCC CATAAATATTACGTTCATGTATTGAAATTTGTGAGAGGAGATATTAATATAGTGGATTAAGGAGGTTATAAACTAGTGGCTCACTTCTTGCGTT TGCTTTTTACAGCGGTGGAGGATGAAGGATTACTGTGCCAGTTCCTTTTTCTTTGGTTGATGAACCAATTGTTGATCTGCTTTAGTTGTAATCC TGTTTCTTGTACCAATCTTGCTTTGTCTTCCTCGGTAGGGTAAGGCCACTTAGAATGGGATTGCCACCAGGCTTTAAGGAGGGAAGTGGTGTCT CCAGGCAGTTTTCCGGCTCTTCTTTTACGTAGAATTTCTTCTCTGATGTCCACAATTTTCTCCTTATAGCCCTGCTTCAGCTCGTGCTTTAGCT CTTGTCTAACACGCTCCATTAAAGAACGCTCACTTTCAGTTGGAAGACCAAATCCCATGCTGTCTGAAACATCAAGGCCTCCATCAAATAAGTT GGCGTCACTATCTACTTGTTCCTCATCATCATCAGACATGGTTGCGCCTGTACCCTCACCAGGTGCCACACCTGTTAAGCTTTGTAATGATTGT TCAAGCTCCCAACAAGCCATGACTGCTTCCATTGCATGAACACGAACATGTTGCTGCAGTTGTTCTTTAAATGAAGAGAGCAATACAACATAAT GTGCCATAAACTGATTAAGCTCCTTGTCATCAACAGGCTGATTATGATTCCCGAAAACAGAGTACTTAGCAACAACCTGGTCACTCTGAGCCAA CTGAGCATCAATCCTAGGCAACTGATCAACAGGAGTAGCAATCCTTAAACACGACACGTGTGCCGACAACAACTGATCATACATAGGATGAGAC AATATATCTGCTTTACATTTAACGAACTCCCAGTTTCTCTCACTCCCATTATCATTTACACCCCGTTGACTTAACTTATGCTGCTCATTTGCTA TACTACTATCATTATTATTATTACTATCTGGTGCTCCAAACATGGATGAAGACTCACGATGATGATCAAGTGATGTAGTGACTCTAGGAGACAG CCAGTTTGAGTTGGATGAGTCTGAGTTAGTTGTTTGCAGGTGAAGGAAGTTGGTAGGACTTGTGGTGACGTCAGCATGGGTGGTGTAAGAGTTG TTGTGCTGACTGAGAATTGCACTGTTGAGCCATGTGGGTGGTGGTGATTGTGAGGTTTTTGGTGAGTGGTGGTCAGAGGGTGGTGGGAGGATGG TGTCTATGTTTTCCGGTAGGTGGTGATGGTCGGAGTAGTGGTGGAGAGCCATTTCGTCGTGGAAAGACATTTTTCTAGAGAGAGAGAGAAAGAG AAAGAGAAAGTTTGTTTTAGAGAGAGAGATGGAAATGT |
Primers for UN64514 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GTGAGTGGTGGTCAGAGGGT | 60.006 | 20 | CATTTCCATCTCTCTCTCTAAAACAA | 59.38 | 26 | 164 | 1284 | 1447 |
2 | TTTGGTGAGTGGTGGTCAGA | 60.129 | 20 | CATTTCCATCTCTCTCTCTAAAACAA | 59.38 | 26 | 168 | 1280 | 1447 |
3 | GTGAGTGGTGGTCAGAGGGT | 60.006 | 20 | CATTTCCATCTCTCTCTCTAAAACA | 58.176 | 25 | 164 | 1284 | 1447 |