Simple sequence repeat (SSR)
>UN64419 TATCAAATCAATACCATAGACAATCATAAAACTCGTTACACCACATAAACCGTTATCACATAACCAAAAGTAGCAACATTGTTACAAAACCCCC TAATTTCACCACATATTAAATAAAAAAGCTAATTAGCACCCTAACCTCCATAAACCTCAAGCATCAGCAGAATTATCCTTAACATCACTCGAAA TACGCAACCCCGAACTAACCGTACGACCGCGCGTCCTAGACGGCAAAATATTCTCCAAATCAACTTCAGCCAACGGATCATCCTCAAGATCATC ATCATCAGACTCACCACTCAAATCACCATCATCACTGTCATCTGAATCATCACTATCATCATCATCACTCTCTTCAATCATCTTACCTTTACCT TTATCATCCTTCACTATACCTTTACCTTTCCTATCAACTGCCACGTCATCATCTTCCACCTCATCATCTGAATCACCTTCGTAATCCTCTTCAT CTTCTTCCTCGTCTGAGCCTTCATTTTTGGCGCCATTTTCTTCGGTGAGTTTTTCTTCTTCTTCTTCCACGATGGTTTCTGGTCGGGGTTTTTT GACGTCGGCGGCGGCTAGGTCAAGGTTTTCGGCGGGTTGTTTGCGTTTGGGAGGGAGAAGGTTTTGTGGTTCGTCATTGGTGTTGAGTTCTGCC ATGGCTTGTT |
Primers for UN64419 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TCCTCGTCTGAGCCTTCATT | 59.95 | 20 | AAAACCTTCTCCCTCCCAAA | 59.912 | 20 | 154 | 476 | 629 |
2 | TTCCTCGTCTGAGCCTTCAT | 59.95 | 20 | AAAACCTTCTCCCTCCCAAA | 59.912 | 20 | 155 | 475 | 629 |
3 | TCCTCGTCTGAGCCTTCATT | 59.95 | 20 | ACACCAATGACGAACCACAA | 59.855 | 20 | 172 | 476 | 647 |