Simple sequence repeat (SSR)
>UN03453 TTCGCTTGCTAATTTCATTCTATATCATCATAAATTTGGTGTAATACATAACACCACATAATTACACAAGAGGACTACCCTGAACAAATTCAGT AAAACCCAAAGCAACCAAACCCAACATAGCAAATCTACCATTCCACAACTCAGCATCTGAAGTCATAAACCCATTTGACTTTGACTCAGCTCTC ACTCCTTTAAACAAAGGCACCAAAGAAGCTAAAGTCAATACAACACTTGTCCCAACAAACAAAGTTAGCCCACCGTTAGATATTTGGGTGAACA AGTCTTGGCCATTAGCCAACTCAACACCCAAAGCTGACACAAACCCTATCATGGCTAACCTTCCATTGATTCTTTCTGGTGCTGGTCCACTGAA TGCTAACAAGTCTGAGAACTTTGTGCTGACTTTAGGAGCCGGTGGTGGTGGTGGTGGGGTTGAGCTCATTTGTGGTGGTGGTGTTGGGGTGGCT GCTGATGGTGGCTTGATGTCATCTTGTGGTTGTGACATGCATTTAATGGTTCTAAAGGTGGTGATGTTGTTAGTCTTTTTGTGAAAGTGAGTGA TGGGTGTTGCTGAGAACACTGAAGAAGCTGCCATGGTTGTTGAGTTGAGATTGAAAATGTAGTTGTTCAAGGTTATTGTTGTGAAGAATGTTTG TTT |
Primers for UN03453 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | ACCCAAAGCTGACACAAACC | 60.012 | 20 | ATGACATCAAGCCACCATCA | 59.925 | 20 | 185 | 308 | 492 |
2 | ACCCAAAGCTGACACAAACC | 60.012 | 20 | CAGCAACACCCATCACTCAC | 60.162 | 20 | 269 | 308 | 576 |
3 | CTCAACACCCAAAGCTGACA | 59.873 | 20 | ATGACATCAAGCCACCATCA | 59.925 | 20 | 191 | 302 | 492 |