Simple sequence repeat (SSR)
>UN63920 TCATGAAAAATGAATACAAAACAGTATTAAAGGTTCCTACCATAATATTCACCATTCAAACTTATAGGTGCTGGAGCTTGATAAACATCATCAT CATCATCATCATCATCATCATCATATTTATTATCTTCGTAACTTGGCTTGAATTCACGAACTTCACCTTGTGAAGGAGGTTTCACGTGTACATA TGTAGAGTCGTTGTCATATTCAGACTTGGGTCTGTTACCTGCAGCCATGTCTCCTACCGAAAGCGGCTTAGCACGTTCTTGATTCACCGAAACT TGCCCAAGGCTACGGTTGATCATATATCCAGGTTCATCATGATATGAAGTGACTCGGTCTCCAGCAACGTCTGTGAATTCGGGTGCTGGTTTGT GTTCATCGGTGTGACCCTTTAGAGTACGCTGTTGTTGGTCTTCCGAAACTGAATTTGGTCGAGTTCCAAACGCGTCTGAGAATGAGTGTGGCGA GTTAGAGCGGGTTTCGGTGTATCCGGAGTTGTAAGAAACGTTTCGTGCATATGTTGGTGAAGGAGGTGAATCCATTACTGATGATCACAATTTA CGGATGAGGGAGGAAATTTGATTA |
Primers for UN63920 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CCATTCAAACTTATAGGTGCTGG | 59.906 | 23 | ATGATCAACCGTAGCCTTGG | 59.955 | 20 | 254 | 52 | 305 |
2 | CCATTCAAACTTATAGGTGCTGG | 59.906 | 23 | ATGGCTGCAGGTAACAGACC | 60.142 | 20 | 185 | 52 | 236 |
3 | CCATTCAAACTTATAGGTGCTGG | 59.906 | 23 | CACGTGAAACCTCCTTCACA | 59.72 | 20 | 131 | 52 | 182 |