Simple sequence repeat (SSR)
>UN63634 CGGAGTACCAAACATCAAACTTGTCAACATCACCAACTAGCCAATTCATCAAAATCAATAAAATTCAATAAATTTGATGAATGTAAAAAAAACC TGCAAAAACTTGTCAAAAATCTTTACATTCTTCTCCATCTAATTATACCAATTCTACACTAAACTCCACTAAATATCCTTCTTAACTGTTGACT GCTTCATCGCTTACCCTTACGGATAAGTAATATACAAACACATATATAATATACCAAGATCAGATCACGATCACAAAAGATAAGTAATCTTCAG GAAACTTTTTCTCGTTCTCAGCTCATTGCCACCAGATCTTCCTCGTTTGGTGTCATGTTTAGATCAGGCACAACAAATCCTCTTTGTGGTGCTT CGGTTTTTGCTTCTACTCTAATAGATATTTTGACAGATTGGCTGGCTAGAGAAGGTGTTTTCGTCTGTCTTTGATGCTCTCCCATCCTTCCCAT CTTGTTTATCAGTTTCTGATCAGAATCAACCTTAATTCTCTTTACATTCTCGTTTGTTGTAGCCAATTGTTGATTCAATGTCACACGCTTTGAA GTCAATTCCTTACTGGATCTAGCACCACACGACAGATCTGAAACTCCATCACTACCAGAACAGCCACCACCGCTCCACGAAAGATGCGTTGTAG GACTACCACGGTGGTCTTTACTCGATGACTTTGACCTGATTTTCCGGTTACTCCATCCCGGAGGCGGTAACAAAATCCTTCTTGATGGTGTTGT AACATCTTTTGAAGGTATTATTAAATTTTTGGATGAATCTGAATCTGGAGAGCTTTTTAGTTGTAAAAGAAGCTCAACGACTAGTGTATCGTTT TTCAAGGCGGATTTGACCCATTGGTCTGATGATGATGATGATAACGTCATCATCGGAGATGTATACGGTTTGTGATATGTGTTTTTAGTGTGTG TGTTTTTGGGAGAGGAGGAGGAT |
Primers for UN63634 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TTTTTCAAGGCGGATTTGAC | 60.053 | 20 | ATCCTCCTCCTCTCCCAAAA | 60.008 | 20 | 120 | 844 | 963 |
2 | TTTTTCAAGGCGGATTTGAC | 60.053 | 20 | CCTCCTCCTCTCCCAAAAAC | 60.045 | 20 | 118 | 844 | 961 |
3 | TTTTTCAAGGCGGATTTGAC | 60.053 | 20 | CCTCCTCTCCCAAAAACACA | 60.081 | 20 | 115 | 844 | 958 |