Simple sequence repeat (SSR)
>UN63303 TCTTTGAAGTACAACTTCGTCAACAATTAGCCTTGTCTGTTTTGACAAAGTAGGATAATTCGCGCATAACAAGTTCTCGTTACCGTATGCACCG CAGAATTGGTTGTTGCCCAAATTGCGAAGGGCAACGACATTGTCTTTAATTTGGACAAAGGAAAATAAGGTCTCAATAGAGCCATCATTTACTT CAGCCTTTATCCAGTTATCTCTGCGTCTCCAGAACTTGCCACTGTACACGTCCTTTATACGATAGTTTCCATCAGCAGTGGTGACGAGCTCCTT GGCCACCCATTGATCTCCGATATCCAATCCGGACTGGAACTGCTGATATATGAGATTAGCATAAAGGGATTTCGCGGCGAGGTAATCGCCATTT AGGTCTTCAGATCTGAACGCGACTCGAGAGGGTAGTACCAGCACACTATTATTATCCCTTAGAATAAAAGAGGATCCAGTAGCGGATAGGAGCA CGCCTTCATCATCAGGGCTTAACGAGATCCCAGTCCCAACGTGGCGTAAGCGGACACTACTTTGATCATCATCATCATCTGCCAAGGAATGAGG CTCGAACAGGGTGCATGTGGCTTTTGATTTGTCTTCCTCGGGTTTCTTGGCGGATGCAACAATCCAAGAATTCGACTCCATTACCAAATACTTA TTATTGTACAACGACCTTATGTGAAACAGCCGGCCCTCTCCAGTTTTGGCTGGCTCCGCTGCGAACTTAGCTCGTGGACTCCATATTTGTTCTT GATCGAATTTCAAGAACCCTGATGGTAGGTTAGCTGGGATGTTCTCCGTTAGGCTCAAGTATTTACCTCCAGATTGTAGCATGAAAAAACTTGG AAGTACCATGGCAGGTTTAATAGAGTGTGTATGTGCTTTCTTTTCTATATTGATTGATGGGTTTGATATGCTTATGATAAATACCA |
Primers for UN63303 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CCAGTAGCGGATAGGAGCAC | 59.859 | 20 | CCGGCTGTTTCACATAAGGT | 59.993 | 20 | 240 | 452 | 691 |
2 | GCCTTCATCATCAGGGCTTA | 60.177 | 20 | CCGGCTGTTTCACATAAGGT | 59.993 | 20 | 220 | 472 | 691 |
3 | CCAGTAGCGGATAGGAGCAC | 59.859 | 20 | CCCGAGGAAGACAAATCAAA | 60.044 | 20 | 155 | 452 | 606 |