Simple sequence repeat (SSR)
| >UN03408 TAAAAATTGAAAGAAAATAATAGTAATAATAATAATAATCAGTTCTTTATCAAGACAACATTTGATATCCGATGATGTTCATTCATACTAATTA GAACAAACAAACAAACACAAATCCTCATCAAGAAACACACACGACAACGATGACAACAACAACAACAATAACCCCTCGGTTCTCATCCTAACAA TACAACAATGTTTTTATGGGGATACATTTTTCATTCATAATCTCAATACAGTGCAATCAATGTCATCATCCTCAAACGGCGGCGGCATATTTAA ATCAAACGACAAAAACGGTTTGGTAAAACTGGAACAAACCACACCATCTTCATGTCCCAAAACACCATCGTCATCCACAACGGAAGAAGACGAA TCACAATCACTCCTACAATCATCAACCCTCCTCCTAGGTTCTTGTCGTGCTAAACGAACAACATTAGTCATTGGTCTAGGCCCACTAAACGACT CAAGAGTACTACTTAAACTACTACAAGTAGGCCTCACAATATTCTGGTACTCGGGTACCTGATTTAATCCACTTATACCATTTGCAACATTATA CGAAAACTGATTATTATTTTGATACTGATAATAACTATTATCATTATTACCATCGATGGGTTGAGCAGAGTGAAATGCAAAATTGGTTCTGGCT TTAGGGCCACGGAGAGATAAGGCAGCCGCGTCGTAAGCACGCGCGGCGTCTTCAGCGGAATCAAAAGTACCTAACCAGACACGGGTTTTTTTCC ATGGATCTCTTATTTCTGCAGCGTATCGGCCCCATGGTCTTTTCCGAACACCTCTGTATCTGATATCGGATCCGGATCCGGGTACATCGGGTTT GGTGGCTCCTGTGGTTGGTCTGCCACGTGGCATCGCCGATGATGGTTGTAACCAAAAACCAGATTGGAATGAAACGAAATGAAAGAGTGTGTGT GTGGTCAAAGTGTTTGTTTGTGTGTGTGTGTGTGGGTGGGATTTTGAGATGAAAATAAAGATAGGGAGATGAGATAATAGTAGTGTGATTTTCG ATGTTTGAAAATTGTTTATGGGGGTTTGGGTTACTTTATTTTTTTTTAGAAATGGAAATGGATGAACCCTAAACTATCCTTGTTCT |
Primers for UN03408 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | TGGTCTTTTCCGAACACCTC | 60.088 | 20 | CCCAAACCCCCATAAACAAT | 60.644 | 20 | 278 | 787 | 1064 |
| 2 | CATGGTCTTTTCCGAACACC | 60.353 | 20 | CCCAAACCCCCATAAACAAT | 60.644 | 20 | 280 | 785 | 1064 |
| 3 | TGGTCTTTTCCGAACACCTC | 60.088 | 20 | ACCCAAACCCCCATAAACA | 59.895 | 19 | 279 | 787 | 1065 |