Simple sequence repeat (SSR)
>UN62735 CTACAATCTCAAAAGGTATGTGTTCACTTTCATAAAAAAAAACTCAACAGGGATGGATTACATGAGAAAAGTAAGTTACAAAGCCTCAACCAAA ATTTCAGGGAAAACAATTCCAGCAACTTTTTTTTTCCTGCAAATCTTAACCACAAATTACAACAATTATACACCACACCACCCACCAATCCGAT CCCTATAATCCTTTAAAAATTGGAGTAATGAACAAAGATTAGGCACAAAAAATGACCTTTTCTCCCCATGGTATACCTACTATGATACATACGC CAGATTTAACTCAAGTGGCCTCAATGCTTCTTGAACAATCTCTTGGACCGTTCGATTGCGTCTGCAAACCTCCGAAAGCTCTTCTATTGGAATT GTCAACCCTTTAATATCTACACCTGATGCCGCATCTGATAACACCTGTAAAAATCTTGATTTTTCCATGTCTGTGGCTGCAGTAGCTGGAATCA ATGATACACTCTCCTTAGCCCACTCTAGAGCTTTCACCCCATATGCACGTGATAGGGCTAGCAGAGCATATGCCACTGTTTCTAATCTTGAACT TGGGAGAGCCCCGGTTGAAGCAGCAACCAAGATTCTGGTGATGCTGGAACCTCGGGGCACAATAACACTATCCCTGATAGAAAGAAATTGTTGT CCCTGACTAGATTTTCCCAGATCAAATATGTCGGATAAGAAGCTTAGTATAGAATTTGACGCCTCCCTGTGCTGCACTGTAATTCCAATCATGG AGCAATCCACCAATGATGGGAATACGGCGGATGGGAAAAGCAAATGTGGGCAATATCGTATGCATCTTGACGCCAGCAAAAAACAATCATCTGC TATATCTGGTCTGGAAGTGAAGTCCTGAAGTTTGGTAAGCAAACATGCTGTATTGCTAAATAGAGATTCGATCAACACTTTTAAGTAGTCGGCA CAAGAAGGATCAGACCCAAATATCTTTATAACTTCACTTGACAGATATAAGAAACATGGTTGATGGTGCTGTTTATATAACCCTTGTATCTCCT CAAGCATTGCTCCAATTGTAACTCCCATATACCTTTTAGATGTTCTCACAGCATGTTTACAGGCCCGGCATAGTGATTCCATCGTCCGCATATC CCAAGCCCGAACATCAAATATGGCTTTGAAAAGTGGCCAGAGTCTTTGAATGGCATCAGCGACAGCTTCTGGATTATTTACATATCTAAATATA TTTGCAAGTCGATCAATATGAACAGTTATTTCACGAGCAGGTTTTTGACCCAATACCAAAGGACCCTGATTAATCACTTCCTGTAAAGGTGCAA CAGCAGGAATGCAAAGTGCCTCAAGAGCTTTCTTAGCTTGGTCTGGAGGAAGCTCGGTGATAACTATACTTAGAGCTTCAACCAGATGCAAAGA ATCTTGAGCCGCAACCTTAAAAGAACCTTCTCCGGTCATTGCCCTTTGGTATATTTGAAAAAGACCGTCCACCGATCCAGATAGCTTTTTCCCA CAGTCATCACAGATGTTTCTGAAAGCCAGAGCAGCAGCAGCAGCAGAATCTTCAGACATACTCATGCCACTCACA |
Primers for UN62735 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TTTGAAAAAGACCGTCCACC | 59.948 | 20 | TGAGTGGCATGAGTATGTCTGA | 59.318 | 22 | 114 | 1464 | 1577 |
2 | TGTAAAGGTGCAACAGCAGG | 59.904 | 20 | TGAGTGGCATGAGTATGTCTGA | 59.318 | 22 | 274 | 1304 | 1577 |
3 | CCTGTAAAGGTGCAACAGCA | 59.904 | 20 | TGAGTGGCATGAGTATGTCTGA | 59.318 | 22 | 276 | 1302 | 1577 |