Simple sequence repeat (SSR)
>UN62572 GCTCCATGCCATTGGCTTCTAACGTAGAGCTTGAAGCCACTACTGTTACAACTTAGCAAGAGAGTGATAGAACTTTGTGCTCTTCTTGGGCGAC CTCTGGATTTCTTAACCAGATAGCTTTAACATCGTTCAAGCGTTCCCATTCGTATGTTGTTTCCTTGATGGTTTTAGTCTTCGATTTTTCTTCA TCTTCCTCCTTGTCAGAATCTTCCTCTTCTTTCTCTTCACCCTCTGTGGCTTCGGGTTTTTCTTCCTCATCACTGGAGTCATCTTCATCAGCAG GCACCTCAACATCAACTTCCTTGCTGGCCCAGAGGTAAATGGGGAAGTTAATGAATTCAGAATACTTTTTCACCAATTCCTTCAATTTTGACTC CTCTAGGTATTCCCCAGCTTCCTCCCTAAGGTGCAATCTAATTTCAGTTCCACGGCCAAGTGGCTCATTGTATGTATCTTCAGAGATAGCAAAA GCACCATCAGCCTTCGACTCCCACACATACTGTTTGTCATCGTTGTGTTTGCTGATAACTTCCACATAGTCGGCAACAAGATATACCGAGTAAA ACCCAACACCAAACTGACCAATAAGGTTAAGATCACCACCTGTCTGCATTTTCTCCACAAAAGCTGAAGTTCCAGACTTGGCAATTGTTCCCAA GTTCTTAATCAAATCCTCCTTTGTCATACCCACACCTCTATCGCGGATGGAAAGAATTTTGTTTTCTTTGTCTAACTTAATCTGGATTTCAAGC TTGGTATCATCACCTTCACCCAACACCTCCTTATCAGTAAGAGAAAGGAACCTAATTTTGTCCAAAGCATCAGATGCATTGGAGATTAATTCTC TTAAGAAAATATCCTTGTTGCTGTAAAGAGAGTTGATAAGGATGTCCATAAGCCGAGATACTTCAGCCTGGAACTCAAACTTCTCCGCATTGCT ACGGAGATTCTTCCTTGTCATTGACTCGGCTTCCCTCTTGGCGACATCAGAATCAGTGGATAAACCATGCGGAACAGCCCCAAGCTTATCTTCA ATCTTGGGTGGATCCACTAATTCATCTGTATCAGCTTCAGCATTCGCATGCAGCTTGAAACCAAATAAGCAAGCTCATATGCTGGGAAAATAAG CTTATTTTCTTTAAGATTATTACGCCTGGATATGGCCAGCAAAACAATCATTACACCTTCATCAAATGAATCAGTAATCAGAAACATCAAGGAA AGGCCAGATGATTTTTAAAACTCTGATTTTTGACAACCGGATGTCGATTTGGGGTTTTTTTCCTGTTTTAAGGGGGTAAGAACACTCAATAAGT TTCTTATGTTTCATCTTGTTTCCTTTGGGTTTGATGATCTTGTACACCTGTTACCAATCCATGGTACATTCTAAGCAATGAGAACGTACACATG ATCCAGTGACATACTGGTCGGCCTTATTGTATATCACTATATCGCATCAAAACATTAGGTCGAATACAATACATTAGCTTGGTGTCCGATTGTT TATTGTGTTTTGATGTAAGTGTCTTTCGTTTGTGTGTGTGTGTTTTTGTGAGCAACAATGTGTGTCAAGAAGGAT |
Primers for UN62572 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GTGACATACTGGTCGGCCTT | 59.997 | 20 | CCTTCTTGACACACATTGTTGC | 60.592 | 22 | 162 | 1416 | 1577 |
2 | AGTGACATACTGGTCGGCCT | 59.604 | 20 | CCTTCTTGACACACATTGTTGC | 60.592 | 22 | 163 | 1415 | 1577 |
3 | TCCAGTGACATACTGGTCGG | 59.545 | 20 | CCTTCTTGACACACATTGTTGC | 60.592 | 22 | 166 | 1412 | 1577 |