Simple sequence repeat (SSR)
>UN61959 AAGTCTAGCAAGCTCGATAGAGATTACAAACGCCTCATAGGTCCAGAACCATAAGTGAAAAAAACGTCATTGTGATACTCTACTACTAGTAGTC ATAAACTTTAAGAGCTCTTGACGGATACTTTTTGTGCAACCAGCTTGATAGCTTCCATCCTTTCATCAACTAGTTTCTGTAGCTGCTCCTCTTG TTTCTTCTTATCATCCTCTTCCATTTCAACTTCCTTTGGGACATCACCACCACCACCACTTGCCTTAAACATTACAAATGATGCTTCAGGATCG TATTCAGTCGGGACATCAATCACCCGTTTCCCAGATGCACCAGCTTCTTTACCTATGACATCAGCCTTGATACGATCCAACACAATGGTCCTGA AATTCTCGAGGTGTTTCTCAATGGGATCCAGAGATAAGTAGATAAGGATTTCCCAACATTGGATCAACTGTCGCTTGTTGATTTTAAGGCTTTT TCTCACTTCTTCAATGGTTTCTGCTGGTGGGCCGAATTTGGTGATTTGGGTTCGTTTGGCTAGGTTTTCTTCCTTTAGACGCATGACAGCTGAG TTCAGTGGAGATTTGATTGCTTCCAATGCGAGTAAACGAGGTATGTCGATGCAAGCCCTTACGTGTTGCAACGATTCAAGTGGCTCTTCAATTG TAAGGTCATACATGTCGTCTGAAACTACCATATCAGTGATTGTCTGAAGAAGATGACCTCCGTAACCCTTGTTTTGATATGGAGGGAGTACCAG TATCTGACCAAGTCTCAACCGGTGGCTGTCAGGGTAATGGAAGAAC |
Primers for UN61959 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GCCTCATAGGTCCAGAACCA | 60.073 | 20 | CCCGACTGAATACGATCCTG | 60.474 | 20 | 263 | 32 | 294 |
2 | GCCTCATAGGTCCAGAACCA | 60.073 | 20 | TGATGTCCCGACTGAATACG | 59.522 | 20 | 269 | 32 | 300 |
3 | GCCTCATAGGTCCAGAACCA | 60.073 | 20 | GTGATTGATGTCCCGACTGA | 59.478 | 20 | 274 | 32 | 305 |