Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN61845
CTTATATATTTAGTTCATGAACAAATGCTACTCGGTTTTTTGAATCATAAAAATAGTCGGAACACATTTCAAAAAGGTTCACGGTTGCATAATT
GGGTGTCGAGAATTTCTAAAATAGAAAGAAGCTTATGTTGATCCATGTATGTAGTAATAGATGTGTTGATTTATTCATCCATGCTTTGATCTAT
ACTTGCAGCCACCAATGGTTTCTTGCGCATTGTCCAAAATGCTGAAAAATAGTGATTTTGCATCATCGATCGGGGATTCGTAGTATAAGTTGTT
TCGATGGTCTTCTCGAGCTCCAACTCAAATCCATAATGGATTGCGATCCTCTTCACGTCTTCCAAACTTAACTCAACTGACATTTCATCTTCTT
GACCATACATATCTGCAAAGTGATAAAGTAGGGGACCTAGGTTTATCCAAACTCCCCCGTCTTTAAGAATTTTTGAGATGATTTCAATGTATTC
AACAATATTGTGGGCTGTATCAAGGAAGAAGCAGGTCACAACTGCATCCCACGCTCCTACTTGGGCCGGGTCGCCATACACTTCAACAAAGTCT
CCACCACACATAGAAAATCCTTCCGTAATCCCTGCACTAGCAGGATGAATATCCGGAATGGAAACTGGACGAAGCTGATCAGCATCAGACAGTG
AATTACAATTGCTGTGAATCCATGGATGAATAGTCCATTCCCCAATAGCTTGAGTCTGATTAAGAATAAAACTTGAGCAGATCATCATGTAGTA
AGAGAATTCATTTCCTTGACTTTTGAAACCAAGACATGAAATTTCCAATGCCAGTCTTCCTAATCCAGCACCTGGAACTAGACAAGACGGAGGG
CTATCTTCACTGCGATTAGGAAAATGGCGTTTCAGTTCTTCAAGAATAGGCTTATAACATTGGTCTCGTTCCTTCTGCCCCTCAGCAGCCCAGT
CTCTGACAATATTCCTAATGACACATCGAACCTTATCAACATCCACTAAAGGAACATGGAAATGGGGCATTGAGTCTAATCTATCAGGAGATTC
AGGAGGTACACATGAAATGTCCTTCTTGGGATCAGTGTCTGAATCAACACTGACATCTATAGCATTGTCACAGCCACCTTTATGAGTGTTTGTT
TTGCATTCTAAGCCTTCGGGAAAGCTTCCAGACTCTGGCTCACAGCAATTTTCCTTTTTCTCCTCATGCCCACCACAAGCTTCGCTACATTGTG
CAGAAGGAGCTCTTCCGCTTATTGAGACCGGTTCAGAACATGGATCCCTGTCTTCTGAGTGATGATGACCACATGAACCGTTATCCCCATGTTC
ACACATTTCATCATCTTGACTCATATCAAAAGGGGGCTCAAACGCCTGTAGCATATCAAAAATGAAATTGGAATTTTTTGTGATACACCGTCTC
AGTTTCTGATATTTTAAAGGAAGGTGTGCCACCAGAGCCTTGTGAGCCACTGGAAGCCTTCTGAAAGATCTCTCATATCTTCTCACATCCTCCT
CTGCAGCTTCCGAATAGTTGATGTAGGCAGAGATGATGCGGCGAAGGGATTGGATTTCAAGGGATTCTTCGTACTTCTTCCGTCGAATAGCTTC
ATCCTCAACTGCTGCTGCTGCTGACTTGTTGTTGTTGTTTGACATTTTTGTTTATGCTTGTATTGTCACTGTGTTTTTGTTTCTGTTTAGCGGC
GAACCAACCAAACAACCAGCAAACAAAGCTTTATTATCTAATAACCAGTTGCTCAAGATGATGCGGA

Primers for UN61845 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1GGGATTGGATTTCAAGGGAT 59.95920GTTCGCCGCTAAACAGAAAC 59.88920147 15501696
2AAGGGATTGGATTTCAAGGG 60.12420GTTCGCCGCTAAACAGAAAC 59.88920149 15481696
3TCCGTCGAATAGCTTCATCC 60.17720GTTCGCCGCTAAACAGAAAC 59.88920114 15831696