Simple sequence repeat (SSR)
| >UN61806 ACTCGCTACAGGGTCTATTTCCCGACCCTTTGACAGAATTTCCTGCCCAACTATTGCCGTTTCAGCTTAAATTCCTCCAACTCCCCAAGTGAGA AAGCGTAACCTGTCAATCATAGTGTGTCAAATGATAAACCATGTAACCCATATTGTATTGCATGGAAAACAGGTAGCACCCGGCATGGCTGCAA GAATGTTTGTGATGTGGTAGCCTCGCCAAGATAGCTCCAATAACCCATAAACCCAGACATCACACCAGTCCTCATTCATGTATTCACAACCAAC GACCAAATACAGGTTGGAAAAAAATGAATACCAAGGCTCAAATCTGCCGATGTGATTTAAAGATGATTAATTACTTGTAAGCACAATTTTTTTT AATGCTTGATCAAGATAGTCTATAGTTCCACTTGCAAGAAGCGATCAATCATTATAGCAGGGCCGCAACTACCACAGTAAGAGTCGTGAGGAAG CAACTGGAAAAACTGCCTTTTTAGTCGGCTTAGTTGCCACAGTTCGCCTCTTTGGTCCAAGACAGCGCTTAAAAGCCGGGCAAACACATCATCC ACTCATACAGATTGAGCACTTGAAGATCTTTATAATCGTCGCACTTCTACTGAATAGCTCCTCCTCCTGACCACTGAAAATCACCCACATACCG CCAACTCCCACTCTTCCAGTATATGGATTGGGCTCCTTTAGATCTCCGCCAACCCCATTGTAGCACAAACAATAACGCACAAATCTGACCCCAC GGCTATGCTCAGTAGTAGGCCTATCCATATATGTTTATGGAATCTGATCTCGGTTTGTTTGGAGATCAAAGCGTATGCGTGTGTGTGTGTGTTC GGATGGATGGATCAAGAAGATTCCCCCAAATTAATTAAAACCCTAAATGATGATATAGAGAAGATAAATGAAAGTGGTGGATTTTTCTAGAGAG ATGAGATGAGAAATATCCTGGCAAGTGTGAAGGCG |
Primers for UN61806 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | TGACCACTGAAAATCACCCA | 59.935 | 20 | GGGAATCTTCTTGATCCATCC | 59.719 | 21 | 240 | 632 | 871 |
| 2 | GAAAATCACCCACATACCGC | 60.199 | 20 | TGGGGGAATCTTCTTGATCC | 61.164 | 20 | 235 | 640 | 874 |
| 3 | CCTCCTCCTGACCACTGAAA | 60.229 | 20 | TGGGGGAATCTTCTTGATCC | 61.164 | 20 | 251 | 624 | 874 |