Simple sequence repeat (SSR)
>UN61802 CCTCTAATTTTTTTTTCTCTAACCCATTTCATTAAATACTCGTTGCACCCTTCATCAAGCATCCATCATGAGGCACATTACATTTCAATAAACA GTTTATGGCCGTCATCCAACCTAAGCACTGGAAATCACCCACATACCGCCAACTCCCACTCTTCCAGTATATAGATTGGGCTCCTTTAGATCTC CGTCAACCCCATTGTAGCACAAACAATAACGCACAAATCTGACCCCACGGCTATGCTCAGTAGTAGGCCTATCCATATATGTTTATGGAATCTG ATCTCGGTTTGTTTGGAGATCAAAGCGTATGCGTGTGTGTGTGTGTTCGGATGGATGGATCAAGAAGATTCCCCCAAATTAATTAAAACCCTAA ATGATGATATAGAGAAGATAAATGAAAGTGGTGGATTTTTCTAGAGAGATGAGATGAGAAATATCCTGGCAAGTGTGAAGGCG |
Primers for UN61802 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | AAGCACTGGAAATCACCCAC | 59.973 | 20 | TGGGGGAATCTTCTTGATCC | 61.164 | 20 | 242 | 117 | 358 |
2 | AAGCACTGGAAATCACCCAC | 59.973 | 20 | AATTTGGGGGAATCTTCTTGA | 59.764 | 21 | 246 | 117 | 362 |
3 | AAGCACTGGAAATCACCCAC | 59.973 | 20 | GGGAATCTTCTTGATCCATCC | 59.719 | 21 | 239 | 117 | 355 |