Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN61619
TGAGAAACAGCACCATCAGGAGTTTGGTTGTGATAATCAAATAGTTCATATTGAGAAACAGCGCCATCAGGAATTTGGTCTGTTCTAGAGACTT
CATTGCGACAGGATTCTTCTAGTAAAATATTTCTCTCTAAGTTAGCCTGTGCCTCCTCCTGTTTACTTTGAGATGCAACGTTAAGGTCACGAAC
GATCTCATCATTATTAAAAGAAACAGATTCAGGTTTTTCGGCAGAATCCACATCATTAGTCTCAACTACATCTCCGGCTGGAACGGACGCGAGG
GACTCCTGGTTAAAACCTCCAGTGATCAAATCAGTGTCACAACTTAATTTCGTAGCTGGAGTTAGTGATGGTTCAGCTTTCTCTATTTCACTAT
GACACCCAATATGGCCATTTCTCGCATTATCTCCTCCTTCGATCTCCATTTCATCCAAGGTGACTTGCTCCTCGTCGTTTGTAGGTACAGCTGA
CGCTGCTGGCGGTGATGGAGATGGTGAAGGTGAAGGTGATGGTGACGGTGATGATGGTGATGATGATGATGATGGATCATCAACATGGTCGTCT
TTTCTTATGTCTTGGTGAACAAGATCCGCAGCATCTACAGAAGCTTCATTCAAAGAAAAATCAACAGAACTGTTGATGTTGACGTGATTTTGTT
TATCCAAGTTTCCTTCACCAATTATAGAGATCAAGTATGCAGATATGTCCTTGCATGACTCGAATTGCCGACCACTGGGACTTATGAATCGGCG
ACAAAACAACCAAACTCTCCCTTCCTTCTTCTTAATACTCAAACTCACCTTCCACCCTTTCGGCAACACATCACCAAACTCACTGGCATCAACA
ACTCTCCT

Primers for UN61619 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1ACTTGCTCCTCGTCGTTTGT 59.91420TGTAGATGCTGCGGATCTTG 59.97220165 439603
2AAGGTGATGGTGACGGTGAT 60.24620AGTTTGGTTGTTTTGTCGCC 60.01520266 503768
3AAGGTGATGGTGACGGTGAT 60.24620TGTAGATGCTGCGGATCTTG 59.97220101 503603