Simple sequence repeat (SSR)
| >UN61516 TTGCTTCAAAGATCCGAGCATTCAATATAATTCAGCATAAAGATGTTTCATCATGACCACTACATTACATAGAGGGGATGCTAAGTTCAGGCCA TTGGCTAAATTACAAATGACCATTTTATAGCCCTATTTAGTTCAAGGAAACGGAATACACAAACATCAAGTATCACTACAGTTGGAACCAAAAG CATCCTACTAGCCAAATGAGAGTAACGTCGTATAACATCATTGAGCATACACCGAGTGTCTTCAAGATATTACAACCATAGTATGATCTTTTGT AGCTTGATACATCCCTATTGTTACATTACCTAAAGCTTCTTTTAGGTCCCTGCCTAAGCATCACCCTGTGGTTCTTGTTGCTGCTGTTGTGGCC AAAGAGGCTGAGCCATATATGGATTAGGCTGCTGTCCGTAAAGAGCTTGAGGATCAACGGGCTTACCCATATACATCCCTGAACCACCAACTTG GGGAGGAGGCATATAATAATAAGGGAGACCCTCAGTCGGACCTCCAACCGGGAGAGGCCCACCTCTAGGCATTGTTGATGCAAGTACCTCATCT TTTAAATCCTCCCTTGGAACAATATCAACTAGAAAGTCGAAAATATCAGTCCTCGTGATTGCAGCTGCAATGTCGTTTTTCTGAAGCGTTCTTC GTTTATTCTCTTCAGTATGATTCCATGACCTTAAAGTCAACTCAAGTATAAACATTTCACATGCGCGAGCAAATATGACAGGGGCTTCAGCTGA TATCATCCTCACATCCTCGTCTGCCTTCATGATCTTTTTGATCCTTGCCAATGGTAGACTATGGTTTTTAAAATCAGTTGTCTGCTCGATTTCT TGGTACTGATTCGCCCAGAAATTCTGAAGTTGTTGATGCAGTTGCTGCTGTTGTTGCTGATGAATGTGCTGATAAGCAAGTTGCTGTTGTGCAA GCTGTCCTGGAGGTGAAGGAAGACCCACAGACTGTTGAGTCTGACCTGGTGGCCCGGAGCCCATCATCTGGTTTTGTGGATATGGGCTTACACC ATATTGCATCTGAGCTGAGCTACCAGCTGTTCCCATGTTCTGTGACTGCCCCTGGTCTTGTTGATCCATGTTTGGATATTACCAACAAATTCTG TCGTGAAATTAATTGATTGATTGATTGATTCAGATTGTTAGGGTTTTGTGAGTGTGTGTGTGTGTGTCAAAGAGGGGAATATATATCAAAGTGG ATGTTTAAGTGTGTGTGTTTTTCTTT |
Primers for UN61516 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | GCTACCAGCTGTTCCCATGT | 60.142 | 20 | CACACACTTAAACATCCACTTTGA | 59.107 | 24 | 185 | 1053 | 1237 |
| 2 | GCTGAGCTACCAGCTGTTCC | 60.164 | 20 | CACACACTTAAACATCCACTTTGA | 59.107 | 24 | 190 | 1048 | 1237 |
| 3 | TGGTTTTGTGGATATGGGCT | 60.192 | 20 | CACACACTTAAACATCCACTTTGA | 59.107 | 24 | 229 | 1009 | 1237 |