Simple sequence repeat (SSR)
>UN60857 GCGTGTACATCATGAGTATATAATACATACTTAGTGGGCCATTAACCCAAATACAAACAACACTAATTATGAATGGGCCTAATAATAAATCCGC TAACAGATGAGAATATAATACATACTTAGTAAACTCCAAAAATGTAATCAAAGTGACATATGGACTAAATGCAGAAGGGTCCCTTATATTGATA AAAATTTAGACAATTTATCCACAATCACTTGATCGAACAAACACAATTATCTCTTGAGGAATACAACACCATACTCTTAGGCAAGGCGATTACT AATTACAAAGCTCTTAAGCTACACTGAATGAAGATGCAGTTCCCTCAACGAATTTCTTTGCTCCCTTAAACCATCTCTTGTCACCGGCTTGAGC CTTGCAAATGTAAAGTTTACCGTCATTCACAGTGGCGGTGATCAATTGATGTTTGCCACCCTCATCTCCGTCAGCTGTCCTTGTTAGCACTGAC ACATAGTAGTATTGCTTTCCATCAACAACGGGAGTTGAAACTTCCAATATGTTTGCGGTTGCAACTGCATCTGGTTCAAATCCTCCCTCAGATG CGGTTTTGCCAAAGTAAGCTTGTTTCCCTAGCAAGTAATCAACCTTGGAGAGGAATTCTTCAGGGGAACCGAAATCTTTGATGGATTTCTTATC GGTAGGTTGTACCAAGACTGAAAGGTTGGTTGTGGTGTCAAAGTTGTCCTCGTATCTAAGCACTTGACCAGGGAACTCTACTTCCTTGCTCGGG TTCCATTTCGCTGGAATGGATAGCTTGAATCCGGGACCTTCATACTGTGAGAACTCTGTTGACTTTGGCTTCCCGAACACATTAGCAGCTTCAC CATAAGCAGCATCAGCAGGTGAAACCTTAGAACCAACAGCAGCTGCACCAATAAGAACAGTCAAAGCCAACCTACGCGATATCGAAGCATCTGA GGTCACACCCTCCTCACGTTTCTGCGACCTGCATACAACAACTTGAGAAGGTTTGACAGTAGACACTTGCATGCGAGATGATGATGATGATCTA GTTGGTGTAGTGAGTGCATGGAAACATGAAGTTGCAGCCATTGTGGTTACAAAATAAGTGTGTGTATGTGAGTA |
Primers for UN60857 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GTCACACCCTCCTCACGTTT | 60.009 | 20 | GCTGCAACTTCATGTTTCCA | 59.847 | 20 | 131 | 942 | 1072 |
2 | TCACCATAAGCAGCATCAGC | 59.979 | 20 | GCTGCAACTTCATGTTTCCA | 59.847 | 20 | 230 | 843 | 1072 |
3 | AAGCATCTGAGGTCACACCC | 60.12 | 20 | GCTGCAACTTCATGTTTCCA | 59.847 | 20 | 142 | 931 | 1072 |