Simple sequence repeat (SSR)
>UN60512 GAAAAGTTTATCTTTTTCTACTACATGTTTTGTCTAACAAAAGAATATAGGCTACAAAGTTTGCATTACAAGATGGAGCAGGCAGCCACGAACA TACTAAACATAAAGATACACTTATGTAACTCAAAAAGGAATTTGGGTAAGAGAATCAAGATTAAAGATTCATGAGTGTGTGTGTGTGTGTCATC TTTGAACATCACGCCTTTTTCGATTTTGATAGAGTTTTCTTTCTTTGTCCCAGCATGTAGCCATATAAGTGCGGAATTCCTGGTACGTAAATCG CAAGCACCACAATTGCAGCATAGAAGTAATCAAATGAAAAGTTCCATTTGTTAGGCATCCTGTAGGAATACATTCCAGTTTCCTTCATGTACGG TAGCGCGCTATAGATCATACCAATTTCACTAGAAATGCCGGTTGGATACAACACAAGGAAGGTGCTGTACCTGAGCCATAACAGCCAGTATGGA GTAGAACCAAATGCCTCCTTTGTGCCAAAGAAAGAGTACCGAATGATCTCAGTGATACACCAACTGATGAGCAAAGTGCAAATAATATGATTTG TTTGAACCTGTTACCATCAAGCCTTTTTTGGGATGAAGATTGTGGATCGTGAACTGATAATGTTTTTTTGGGTCA |
Primers for UN60512 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TTACAAGATGGAGCAGGCAG | 59.024 | 20 | AAATCGAAAAAGGCGTGATG | 60.074 | 20 | 149 | 66 | 214 |
2 | TTACAAGATGGAGCAGGCAG | 59.024 | 20 | TATGGCTACATGCTGGGACA | 60.096 | 20 | 188 | 66 | 253 |
3 | GGCAGCCACGAACATACTAAA | 60.145 | 21 | AAATCGAAAAAGGCGTGATG | 60.074 | 20 | 134 | 81 | 214 |